C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif (RNP1, RRM) protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354480 RBM3-004 ENSG00000102317 9606 + X:48575899-48578291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000354480
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000354480 1.998±0.00 5.321±0.00 15.054±0.00 7.478±0.00 2.470±0.00 9.261±0.00 6.129±0.00 5.323±0.00 14.526±6.59 23.979±0.00 14.320±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141925 Rbm3-009 retained_intron Mus_musculus 0 595
ENSMUST00000141629 Rbm3-006 nonsense_mediated_decay Mus_musculus 0 318
ENSMUST00000115616 Rbm3-004 protein_coding Mus_musculus 0 296
ENSMUST00000115617 Rbm3-003 protein_coding Mus_musculus 0 294
ENSMUST00000040010 Rbm3-005 protein_coding Mus_musculus 0 294
ENSMUST00000129947 Rbm3-007 nonsense_mediated_decay Mus_musculus 0 291
ENSMUST00000115621 Rbm3-001 protein_coding Mus_musculus 0 283
ENSMUST00000115615 Rbm3-002 protein_coding Mus_musculus 0 281
ENSMUST00000115619 Rbm3-011 protein_coding Mus_musculus 0 281
ENSMUST00000121422 AC121113.2-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000122364 Gm10156-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000120263 Gm13624-001 processed_pseudogene Mus_musculus 0 243

Loading