C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif (RNP1, RRM) protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489344 RBM3-001 ENSG00000102317 9606 + X:48574524-48577735 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyMuscleOvaryPlacentaTestisENST00000489344
Transcript ID Adipose Bladder Brain Breast Colon Kidney Muscle Ovary Placenta Testis
ENST00000489344 156.478±0.00 3.520±0.00 22.524±11.28 43.689±26.69 8.967±0.00 7.456±0.00 7.839±0.00 48.382±25.26 115.320±0.00 23.122±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115617 Rbm3-003 protein_coding Mus_musculus 0 455
ENSMUST00000129947 Rbm3-007 nonsense_mediated_decay Mus_musculus 0 453
ENSMUST00000115616 Rbm3-004 protein_coding Mus_musculus 0 451
ENSMUST00000115615 Rbm3-002 protein_coding Mus_musculus 0 442
ENSMUST00000115621 Rbm3-001 protein_coding Mus_musculus 0 438
ENSMUST00000141925 Rbm3-009 retained_intron Mus_musculus 0 357
ENSMUST00000040010 Rbm3-005 protein_coding Mus_musculus 0 294
ENSMUST00000141629 Rbm3-006 nonsense_mediated_decay Mus_musculus 0 291
ENSMUST00000115619 Rbm3-011 protein_coding Mus_musculus 0 279
ENSMUST00000121422 AC121113.2-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000122364 Gm10156-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000120263 Gm13624-001 processed_pseudogene Mus_musculus 0 241

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