C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF type zinc finger domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042312 Trafd1-001 ENSMUSG00000042726 10090 - 5:121371725-121385632 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042312
Transcript ID Adipose Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042312 9.793±2.15 19.022±1.23 25.027±15.70 8.970±1.66 4.086±2.35 5.282±0.99 8.874±3.71 6.097±3.18 8.141±2.80 5.363±2.15 37.565±14.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0034097 IEA response to cytokine
GO:0045824 IMP negative regulation of innate immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257604 TRAFD1-201 protein_coding Homo_sapiens 0 1419
ENST00000412615 TRAFD1-001 protein_coding Homo_sapiens 0 1419
ENST00000552890 TRAFD1-003 nonsense_mediated_decay Homo_sapiens 0 483

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