C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF-type zinc finger domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412615 TRAFD1-001 ENSG00000135148 9606 + 12:112125501-112153609 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000412615
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000412615 8.335±0.00 10.987±0.00 0.719±0.00 5.508±4.61 5.388±3.65 5.426±4.06 2.261±1.36 4.132±2.71 2.047±0.77 4.455±1.30 2.772±0.00 8.647±4.98 10.682±3.32 18.462±4.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0045824 ISS negative regulation of innate immune response
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042312 Trafd1-001 protein_coding Mus_musculus 0 1419
ENSMUST00000120784 Trafd1-002 protein_coding Mus_musculus 0 1358
ENSMUST00000156158 Trafd1-003 retained_intron Mus_musculus 0 315

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