C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TRAF-type zinc finger domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552890 TRAFD1-003 ENSG00000135148 9606 + 12:112125560-112149808 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENST00000552890
Transcript ID Brain Heart
ENST00000552890 0.906±0.00 0.548±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0045824 ISS negative regulation of innate immune response
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120784 Trafd1-002 protein_coding Mus_musculus 0 483
ENSMUST00000042312 Trafd1-001 protein_coding Mus_musculus 0 483
ENSMUST00000156158 Trafd1-003 retained_intron Mus_musculus 0 279

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