C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: remodeling and spacing factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042399 Rsf1-201 ENSMUSG00000035623 10090 + 7:97579896-97692782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleOvaryENSMUST00000042399
Transcript ID Brain Heart Kidney Muscle Ovary
ENSMUST00000042399 1.396±0.00 0.354±0.05 0.652±0.00 0.486±0.03 1.307±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly
GO:0006338 IEA chromatin remodeling
GO:0006352 IEA DNA-templated transcription, initiation
GO:0008270 IEA zinc ion binding
GO:0016584 IEA nucleosome positioning
GO:0031213 IEA RSF complex
GO:0042393 IEA histone binding
GO:0043392 IEA negative regulation of DNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0050434 IEA positive regulation of viral transcription

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308488 RSF1-001 protein_coding Homo_sapiens 0 5784
ENST00000440064 RSF1-004 protein_coding Homo_sapiens 0 510
ENST00000467567 RSF1-002 retained_intron Homo_sapiens 0 424
ENST00000480887 RSF1-003 protein_coding Homo_sapiens 0 4364
ENST00000526324 RSF1-006 protein_coding Homo_sapiens 0 1989
ENST00000528095 RSF1-005 protein_coding Homo_sapiens 0 1925
ENST00000530604 RSF1-008 processed_transcript Homo_sapiens 0 276
ENST00000531026 RSF1-007 protein_coding Homo_sapiens 0 1157
ENST00000531768 RSF1-011 retained_intron Homo_sapiens 0 542
ENST00000532556 RSF1-010 protein_coding Homo_sapiens 0 451
ENST00000534794 RSF1-009 processed_transcript Homo_sapiens 0 610

Loading