C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: remodeling and spacing factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528095 RSF1-005 ENSG00000048649 9606 - 11:77701119-77820711 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverLungMuscleOvaryENST00000528095
Transcript ID Bladder Breast Colon Heart Liver Lung Muscle Ovary
ENST00000528095 2.288±0.00 3.694±0.00 3.402±0.00 1.096±0.00 7.239±0.00 3.657±0.00 0.451±0.00 3.473±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JG CIL_0001JG_0002 CGP 11:77659996-77918432

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0031213 IEA RSF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042399 Rsf1-201 protein_coding Mus_musculus 0 1925
ENSMUST00000156060 Rsf1-002 retained_intron Mus_musculus 0 1925
ENSMUST00000107153 Rsf1-001 protein_coding Mus_musculus 0 1925
ENSMUST00000127891 Rsf1-004 processed_transcript Mus_musculus 0 424

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