C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: remodeling and spacing factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000526324 RSF1-006 ENSG00000048649 9606 - 11:77683769-77725680 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000526324
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000526324 1.420±0.00 3.382±0.41 2.314±0.00 2.894±0.00 1.502±0.87 1.522±0.00 2.613±0.00 2.411±0.31 0.305±0.00 2.570±0.00 10.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JG CIL_0001JG_0002 CGP 11:77659996-77918432

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0031213 IEA RSF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042399 Rsf1-201 protein_coding Mus_musculus 0 1989
ENSMUST00000107153 Rsf1-001 protein_coding Mus_musculus 0 1989
ENSMUST00000156060 Rsf1-002 retained_intron Mus_musculus 0 1735
ENSMUST00000123731 Rsf1-003 processed_transcript Mus_musculus 0 649
ENSMUST00000150288 Rsf1-006 retained_intron Mus_musculus 0 368
ENSMUST00000135270 Rsf1-005 processed_transcript Mus_musculus 0 228

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