C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family G (with RhoGef domain) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042438 Plekhg1-201 ENSMUSG00000040624 10090 + 10:3872667-3967303 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000042438
Transcript ID Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000042438 1.560±0.24 1.250±0.00 2.677±0.00 0.343±0.00 0.140±0.04 0.404±0.19 3.639±0.06 4.136±1.73 0.875±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OK CIL_0005OK_0002 CGP 10:3540240-3967303
CIL_0005ED CIL_0005ED_0002 CGP 10:3740364-4167081

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032321 IEA positive regulation of Rho GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358517 PLEKHG1-001 protein_coding Homo_sapiens 0 3025
ENST00000367328 PLEKHG1-201 protein_coding Homo_sapiens 0 3025
ENST00000475490 PLEKHG1-002 nonsense_mediated_decay Homo_sapiens 0 1157

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