C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005OK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000009765-ENSG00000120278 CGP 9606 6:150368892-150843665
GeneTranscriptPositionBiotype
ENSG00000009765 (IYD)
iodotyrosine deiodinase 		ENST00000229447 (IYD-002) 150368892-150404628 protein_coding
ENST00000344419 (IYD-001) 150368892-150405969 protein_coding
ENST00000367335 (IYD-003) 150368953-150398109 nonsense_mediated_decay
ENST00000392255 (IYD-006) 150368997-150396816 protein_coding
ENST00000392256 (IYD-004) 150368953-150398109 protein_coding
ENST00000422583 (IYD-007) 150369155-150398109 nonsense_mediated_decay
ENST00000425615 (IYD-008) 150369977-150395532 protein_coding
ENST00000500320 (IYD-005) 150368997-150396890 protein_coding
ENST00000546121 (IYD-009) 150369089-150389630 retained_intron
ENSG00000120278 (PLEKHG1)
pleckstrin homology domain containing, family G (with RhoGef domain) member 1 		ENST00000358517 (PLEKHG1-001) 150721088-150843665 protein_coding
ENST00000367326 (PLEKHG1-003) 150599883-150733821 protein_coding
ENST00000367328 (PLEKHG1-201) 150599863-150843663 protein_coding
ENST00000475490 (PLEKHG1-002) 150768686-150842056 nonsense_mediated_decay
ENSG00000213089 (PDCL3P5)
phosducin-like 3 pseudogene 5 		ENST00000398028 (PDCL3P5-001) 150827663-150828384 processed_pseudogene
ENSG00000219622 (RP11-291C6.1)
 ENST00000407887 (RP11-291C6.1-001) 150504811-150510300 processed_pseudogene
ENSG00000224029 (RP11-136K14.2)
 ENST00000456018 (RP11-136K14.2-001) 150624677-150626086 sense_intronic
ENSG00000232891 (RP11-136K14.1)
 ENST00000430770 (RP11-136K14.1-001) 150600834-150605850 sense_intronic
CIL_0005OK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019762-ENSMUSG00000040624 CGP 10090 10:3540240-3967303
GeneTranscriptPositionBiotype
ENSMUSG00000019762 (Iyd)
iodotyrosine deiodinase 		ENSMUST00000019896 (Iyd-001) 3540240-3554877 protein_coding
ENSMUST00000141745 (Iyd-002) 3540288-3552074 retained_intron
ENSMUSG00000040624 (Plekhg1)
pleckstrin homology domain containing, family G (with RhoGef domain) member 1 		ENSMUST00000042438 (Plekhg1-201) 3872667-3967303 protein_coding
ENSMUST00000120274 (Plekhg1-001) 3740364-3967303 protein_coding
ENSMUST00000131525 (Plekhg1-006) 3903582-3919362 retained_intron
ENSMUST00000136671 (Plekhg1-002) 3872667-3964549 protein_coding
ENSMUST00000137111 (Plekhg1-005) 3740665-3938577 retained_intron
ENSMUST00000141367 (Plekhg1-007) 3957891-3963526 nonsense_mediated_decay
ENSMUST00000144543 (Plekhg1-004) 3740378-3938595 retained_intron
ENSMUST00000154727 (Plekhg1-003) 3903586-3967298 protein_coding
ENSMUSG00000082123 (Gm16149)
predicted gene 16149 		ENSMUST00000117631 (Gm16149-001) 3869299-3869607 processed_pseudogene
ENSMUSG00000082605 (Gm16148)
predicted gene 16148 		ENSMUST00000119653 (Gm16148-001) 3946199-3947091 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OK_0001ENSG00000009765ENST00000229447ENST00000344419ENST00000367335ENST00000392255ENST00000392256ENST00000422583ENST00000425615ENST00000500320ENST00000546121ENSG00000120278ENST00000358517ENST00000367326ENST00000367328ENST00000475490ENSG00000213089ENST00000398028ENSG00000219622ENST00000407887ENSG00000224029ENST00000456018ENSG00000232891ENST00000430770CIL_0005OK_0002ENSMUSG00000019762ENSMUST00000019896ENSMUST00000141745ENSMUSG00000040624ENSMUST00000042438ENSMUST00000120274ENSMUST00000131525ENSMUST00000136671ENSMUST00000137111ENSMUST00000141367ENSMUST00000144543ENSMUST00000154727ENSMUSG00000082123ENSMUST00000117631ENSMUSG00000082605ENSMUST00000119653
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005OK_0001ENSG00000009765ENST00000229447ENST00000344419ENST00000392255ENST00000392256ENST00000422583ENST00000500320ENSG00000120278ENST00000358517ENST00000367328ENSG00000213089ENST00000398028ENSG00000219622ENST00000407887ENSG00000224029ENST00000456018ENSG00000232891ENST00000430770CIL_0005OK_0002ENSMUSG00000019762ENSMUST00000019896ENSMUST00000141745ENSMUSG00000040624ENSMUST00000042438ENSMUST00000120274ENSMUST00000136671ENSMUST00000154727ENSMUSG00000082123ENSMUST00000117631ENSMUSG00000082605ENSMUST00000119653
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000009765 ENST00000229447 0.021±0.00 N/A 3.258±0.00 0.011±0.01 0.243±0.23 0.379±0.25 N/A 3.227±2.66 0.268±0.22 0.173±0.00 0.005±0.00 0.777±0.60 0.007±0.00 0.028±0.00
ENST00000344419 N/A 0.019±0.00 0.460±0.00 0.016±0.00 N/A N/A 0.010±0.00 0.107±0.00 N/A N/A 0.002±0.00 0.382±0.00 N/A 0.015±0.00
ENST00000367335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392255 N/A 0.068±0.00 N/A N/A 0.028±0.00 N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000392256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.266±0.00 N/A N/A
ENST00000422583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A
ENST00000425615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000500320 0.034±0.00 0.020±0.00 N/A 0.014±0.00 0.018±0.00 N/A 0.005±0.00 N/A N/A N/A N/A N/A 0.011±0.00 0.027±0.01
ENST00000546121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120278 ENST00000358517 N/A 1.121±0.00 1.077±0.00 1.113±0.26 N/A N/A 1.646±0.00 1.249±0.13 N/A 5.929±0.00 0.992±0.31 1.080±0.22 0.980±0.14 1.426±0.07
ENST00000367326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000367328 10.905±0.00 3.597±0.00 N/A 1.362±0.00 3.290±0.80 1.993±0.85 0.629±0.45 1.450±0.00 0.814±0.22 1.550±0.00 N/A 3.332±1.52 2.181±0.43 1.534±0.49
ENST00000475490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213089 ENST00000398028 0.712±0.00 0.446±0.00 0.713±0.00 0.079±0.00 0.318±0.24 0.089±0.00 0.047±0.01 0.435±0.34 0.112±0.06 0.814±0.42 N/A 0.643±0.47 0.145±0.07 0.412±0.36
ENSG00000219622 ENST00000407887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00
ENSG00000224029 ENST00000456018 0.037±0.00 0.018±0.00 N/A 0.130±0.11 0.069±0.00 0.755±0.00 0.101±0.00 0.088±0.00 0.870±0.00 0.076±0.00 N/A 0.202±0.16 N/A 0.017±0.00
ENSG00000232891 ENST00000430770 0.234±0.00 N/A 0.211±0.00 0.058±0.00 0.159±0.00 0.074±0.00 0.027±0.00 0.083±0.00 N/A 0.744±0.00 N/A 0.218±0.11 0.077±0.00 0.137±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019762 ENSMUST00000019896 0.049±0.03 0.100±0.05 0.080±0.04 0.145±0.00 0.119±0.03 2.333±1.06 0.118±0.01 15.021±1.88 20.603±15.86 1.868±0.16 0.031±0.00 0.272±0.13 0.088±0.06 N/A
ENSMUST00000141745 N/A N/A 0.032±0.00 0.113±0.05 N/A N/A N/A N/A 1.304±0.00 N/A 0.039±0.00 0.699±0.43 0.094±0.05 0.133±0.05
ENSMUSG00000040624 ENSMUST00000042438 N/A N/A 1.560±0.24 1.250±0.00 2.677±0.00 N/A 0.343±0.00 N/A 0.140±0.04 N/A 0.404±0.19 3.639±0.06 4.136±1.73 0.875±0.23
ENSMUST00000120274 2.345±0.04 0.630±0.24 1.710±0.09 1.631±0.59 1.098±0.34 0.891±0.32 1.149±0.41 1.460±0.52 0.622±0.30 2.843±0.24 0.298±0.17 0.882±0.26 3.652±1.98 0.560±0.33
ENSMUST00000131525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136671 0.887±0.01 0.320±0.04 N/A N/A 1.106±0.17 0.688±0.45 0.277±0.02 0.568±0.05 0.164±0.02 1.023±0.23 N/A 2.083±0.67 N/A 0.517±0.09
ENSMUST00000137111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154727 0.653±0.11 N/A N/A 0.488±0.00 0.462±0.10 N/A 0.364±0.05 0.473±0.00 0.211±0.08 0.983±0.13 0.150±0.03 0.856±0.26 N/A 0.432±0.31
ENSMUSG00000082123 ENSMUST00000117631 0.324±0.00 N/A 0.060±0.00 0.308±0.00 N/A N/A N/A 0.436±0.00 N/A 0.338±0.00 N/A 0.305±0.00 0.862±0.43 N/A
ENSMUSG00000082605 ENSMUST00000119653 0.323±0.11 0.342±0.01 0.147±0.00 0.119±0.04 0.445±0.23 0.294±0.11 0.290±0.10 0.197±0.08 0.053±0.03 0.506±0.18 0.078±0.00 0.382±0.18 0.185±0.08 0.108±0.08

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