C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family G (with RhoGef domain) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358517 PLEKHG1-001 ENSG00000120278 9606 + 6:150721088-150843665 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartKidneyLungMuscleOvaryPlacentaTestisENST00000358517
Transcript ID Adrenal Bladder Brain Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000358517 1.121±0.00 1.077±0.00 1.113±0.26 1.646±0.00 1.249±0.13 5.929±0.00 0.992±0.31 1.080±0.22 0.980±0.14 1.426±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OK CIL_0005OK_0001 CGP 6:150368892-150843665
CIL_0005ED CIL_0005ED_0001 CGP 6:150599863-151101887

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042438 Plekhg1-201 protein_coding Mus_musculus 0 3025
ENSMUST00000136671 Plekhg1-002 protein_coding Mus_musculus 0 3025
ENSMUST00000120274 Plekhg1-001 protein_coding Mus_musculus 0 3025
ENSMUST00000154727 Plekhg1-003 protein_coding Mus_musculus 0 2610
ENSMUST00000137111 Plekhg1-005 retained_intron Mus_musculus 0 942
ENSMUST00000144543 Plekhg1-004 retained_intron Mus_musculus 0 942
ENSMUST00000131525 Plekhg1-006 retained_intron Mus_musculus 0 204

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