C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) inhibitor subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042452 Psmf1-001 ENSMUSG00000032869 10090 - 2:151715812-151741310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000042452
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000042452 4.100±0.83 8.183±2.50 3.746±1.17 6.330±1.92 5.936±1.68 5.064±1.59 0.964±0.26 2.469±0.90 4.163±1.40 3.643±0.63 0.845±0.40 7.691±3.51 2.622±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZT CIL_0001ZT_0002 CGP 2:151702008-151744186
CIL_0001ZN CIL_0001ZN_0002 CGP 2:151715812-151874668

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005829 ISS cytosol
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0016020 IEA membrane
GO:0070628 ISS proteasome binding
GO:1901799 ISS negative regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246015 PSMF1-003 protein_coding Homo_sapiens 0 828
ENST00000333082 PSMF1-201 protein_coding Homo_sapiens 0 1120
ENST00000335877 PSMF1-006 protein_coding Homo_sapiens 0 1120
ENST00000381898 PSMF1-010 protein_coding Homo_sapiens 0 309
ENST00000435720 PSMF1-004 protein_coding Homo_sapiens 0 274
ENST00000479715 PSMF1-001 processed_transcript Homo_sapiens 0 621
ENST00000484891 PSMF1-005 processed_transcript Homo_sapiens 0 761
ENST00000618417 MKL1-204 protein_coding Homo_sapiens 0.000009 57

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