C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteasome (prosome, macropain) inhibitor subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032869 Psmf1 10090 - 2:151715812-151744186 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042452 Psmf1-001 151715812-151741310 protein_coding
  ENSMUST00000109869 Psmf1-006 151718265-151744186 protein_coding
  ENSMUST00000123449 Psmf1-003 151727446-151741293 retained_intron
  ENSMUST00000125977 Psmf1-005 151716062-151720995 retained_intron
  ENSMUST00000151656 Psmf1-004 151719485-151729960 retained_intron
  ENSMUST00000155939 Psmf1-002 151716062-151741293 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042452ENSMUST00000109869ENSMUST00000125977ENSMUST00000151656ENSMUST00000155939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042452 4.100±0.83 8.183±2.50 3.746±1.17 6.330±1.92 5.936±1.68 5.064±1.59 0.964±0.26 2.469±0.90 4.163±1.40 3.643±0.63 0.845±0.40 7.691±3.51 2.622±0.54 N/A
ENSMUST00000109869 11.648±0.83 10.979±3.30 10.069±1.45 13.659±0.53 9.870±1.61 10.963±1.50 6.834±3.04 10.423±3.64 14.939±5.04 8.959±0.41 4.969±0.58 15.835±2.30 17.623±9.52 260.616±76.08
ENSMUST00000125977 N/A 5.628±0.00 N/A N/A 2.293±0.00 4.753±0.00 0.670±0.00 N/A 4.157±0.00 N/A N/A 2.423±0.38 0.968±0.00 N/A
ENSMUST00000151656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 317.758±30.13
ENSMUST00000155939 2.367±0.35 3.915±0.03 1.902±0.00 N/A 3.153±0.76 3.583±0.00 1.386±0.30 3.143±1.07 3.767±0.99 4.015±0.50 1.170±0.34 2.960±1.03 1.846±1.06 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZT CIL_0001ZT_0002 CGP 2:151702008-151744186
CIL_0001ZN CIL_0001ZN_0002 CGP 2:151715812-151874668

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005829 ISS cytosol
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0016020 IEA membrane
GO:0070628 ISS proteasome binding
GO:1901799 ISS negative regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022652 psmf1 proteasome (prosome, macropain) inhibitor subunit 1 protein_coding Danio_rerio
ENSG00000125818 PSMF1 proteasome (prosome, macropain) inhibitor subunit 1 (PI31) protein_coding Homo_sapiens

Loading