C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335877 PSMF1-006 ENSG00000125818 9606 + 20:1118598-1168378 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENST00000335877
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENST00000335877 4.121±0.00 1.945±0.23 1.594±0.00 2.321±0.00 2.440±0.90 2.391±0.48 1.850±0.86 2.118±1.36 3.329±0.24 2.847±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000209 TAS protein polyubiquitination
GO:0000278 TAS mitotic cell cycle
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0004866 NAS endopeptidase inhibitor activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005829 IDA cytosol
GO:0005839 NAS proteasome core complex
GO:0006511 IDA ubiquitin-dependent protein catabolic process
GO:0006521 TAS regulation of cellular amino acid metabolic process
GO:0006915 TAS apoptotic process
GO:0006977 TAS DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0010467 TAS gene expression
GO:0010951 NAS negative regulation of endopeptidase activity
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0031145 TAS anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042981 TAS regulation of apoptotic process
GO:0043066 TAS negative regulation of apoptotic process
GO:0044281 TAS small molecule metabolic process
GO:0051436 TAS negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 TAS positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051439 TAS regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0070628 IDA proteasome binding
GO:1901799 IDA negative regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042452 Psmf1-001 protein_coding Mus_musculus 0 1120
ENSMUST00000109869 Psmf1-006 protein_coding Mus_musculus 0 1114
ENSMUST00000155939 Psmf1-002 nonsense_mediated_decay Mus_musculus 0 760
ENSMUST00000125977 Psmf1-005 retained_intron Mus_musculus 0 590
ENSMUST00000151656 Psmf1-004 retained_intron Mus_musculus 0 468

Loading