C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001ZT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078868-ENSDARG00000022652 CGP 7955 6:51724692-51761914
GeneTranscriptPositionBiotype
ENSDARG00000022652 (psmf1)
proteasome (prosome, macropain) inhibitor subunit 1 		ENSDART00000031597 (psmf1-201) 51747117-51761909 protein_coding
ENSDART00000123304 (psmf1-001) 51747115-51761914 protein_coding
ENSDARG00000078868 (tmem74b)
transmembrane protein 74B 		ENSDART00000108534 (tmem74b-201) 51730682-51731371 protein_coding
ENSDART00000156516 (tmem74b-001) 51724692-51731576 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001ZT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044364-ENSMUSG00000032869 CGP 10090 2:151702008-151744186
GeneTranscriptPositionBiotype
ENSMUSG00000032869 (Psmf1)
proteasome (prosome, macropain) inhibitor subunit 1 		ENSMUST00000042452 (Psmf1-001) 151715812-151741310 protein_coding
ENSMUST00000109869 (Psmf1-006) 151718265-151744186 protein_coding
ENSMUST00000123449 (Psmf1-003) 151727446-151741293 retained_intron
ENSMUST00000125977 (Psmf1-005) 151716062-151720995 retained_intron
ENSMUST00000151656 (Psmf1-004) 151719485-151729960 retained_intron
ENSMUST00000155939 (Psmf1-002) 151716062-151741293 nonsense_mediated_decay
ENSMUSG00000044364 (Tmem74b)
transmembrane protein 74B 		ENSMUST00000060196 (Tmem74b-002) 151702008-151707310 protein_coding
ENSMUST00000109872 (Tmem74b-001) 151702311-151712157 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZT_0001ENSDARG00000022652ENSDART00000031597ENSDART00000123304ENSDARG00000078868ENSDART00000108534ENSDART00000156516CIL_0001ZT_0002ENSMUSG00000032869ENSMUST00000042452ENSMUST00000109869ENSMUST00000123449ENSMUST00000125977ENSMUST00000151656ENSMUST00000155939ENSMUSG00000044364ENSMUST00000060196ENSMUST00000109872
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZT_0001ENSDARG00000022652ENSDART00000031597ENSDART00000123304ENSDARG00000078868ENSDART00000108534ENSDART00000156516CIL_0001ZT_0002ENSMUSG00000032869ENSMUST00000042452ENSMUST00000109869ENSMUST00000125977ENSMUST00000151656ENSMUST00000155939ENSMUSG00000044364ENSMUST00000060196ENSMUST00000109872
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000022652 ENSDART00000031597 N/A N/A N/A 3.215±0.00 N/A N/A 2.472±0.00 N/A N/A N/A 2.466±0.00 N/A N/A N/A
ENSDART00000123304 N/A N/A N/A 11.313±0.00 N/A N/A 12.246±0.00 N/A N/A N/A 7.218±0.00 N/A N/A N/A
ENSDARG00000078868 ENSDART00000108534 N/A N/A N/A 0.737±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156516 N/A N/A N/A 1.720±0.37 N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032869 ENSMUST00000042452 4.100±0.83 8.183±2.50 3.746±1.17 6.330±1.92 5.936±1.68 5.064±1.59 0.964±0.26 2.469±0.90 4.163±1.40 3.643±0.63 0.845±0.40 7.691±3.51 2.622±0.54 N/A
ENSMUST00000109869 11.648±0.83 10.979±3.30 10.069±1.45 13.659±0.53 9.870±1.61 10.963±1.50 6.834±3.04 10.423±3.64 14.939±5.04 8.959±0.41 4.969±0.58 15.835±2.30 17.623±9.52 260.616±76.08
ENSMUST00000123449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125977 N/A 5.628±0.00 N/A N/A 2.293±0.00 4.753±0.00 0.670±0.00 N/A 4.157±0.00 N/A N/A 2.423±0.38 0.968±0.00 N/A
ENSMUST00000151656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 317.758±30.13
ENSMUST00000155939 2.367±0.35 3.915±0.03 1.902±0.00 N/A 3.153±0.76 3.583±0.00 1.386±0.30 3.143±1.07 3.767±0.99 4.015±0.50 1.170±0.34 2.960±1.03 1.846±1.06 N/A
ENSMUSG00000044364 ENSMUST00000060196 0.109±0.06 0.266±0.17 0.168±0.05 0.308±0.00 0.094±0.01 N/A 0.476±0.07 0.179±0.02 0.015±0.00 0.087±0.01 0.255±0.12 0.333±0.24 0.080±0.03 0.159±0.07
ENSMUST00000109872 0.167±0.06 0.397±0.10 N/A 0.496±0.00 0.158±0.08 0.138±0.07 0.700±0.00 0.151±0.00 0.014±0.00 0.127±0.06 0.185±0.04 0.262±0.16 0.035±0.03 0.309±0.13

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