C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L22 pseudogene 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395439 RPL22P22-001 ENSG00000213653 9606 - X:82506434-82506812 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLungMuscleENST00000395439
Transcript ID Adipose Breast Heart Lung Muscle
ENST00000395439 0.063±0.00 0.031±0.00 0.029±0.00 0.028±0.00 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TW CIL_0008TW_0001 VISTA X:81908791-82509567
CIL_0008XJ CIL_0008XJ_0001 VISTA X:82142181-82742796
CIL_0007L1 CIL_0007L1_0001 UCNEbase X:82209054-82740401
CIL_0008B3 CIL_0008B3_0001 VISTA X:82233435-82835122
CIL_0008C6 CIL_0008C6_0001 VISTA X:82423471-83024493

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000188151 Rpl22-201 protein_coding Mus_musculus 0 307
ENSMUST00000139685 Rpl22-002 protein_coding Mus_musculus 0 307
ENSMUST00000103191 Rpl22-001 protein_coding Mus_musculus 0 307
ENSMUST00000142735 Rpl22-003 processed_transcript Mus_musculus 0 307
ENSMUST00000121451 Gm12005-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000118652 Rpl22-ps1-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000127659 Rpl22-005 processed_transcript Mus_musculus 0 195
ENSMUST00000180176 Gm9457-201 processed_pseudogene Mus_musculus 1.4013e-45 185
ENSMUST00000126519 Rpl22-004 processed_transcript Mus_musculus 8e-35 150
ENSMUST00000156445 Rpl22-007 processed_transcript Mus_musculus 1e-28 130
ENSMUST00000150485 Rpl22-006 processed_transcript Mus_musculus 1e-28 130
ENSMUST00000118224 Gm15421-001 transcribed_processed_pseudogene Mus_musculus 0.000000000000008 84
ENSMUST00000051985 Orc5-004 processed_transcript Mus_musculus 0.000000000000008 84
ENSMUST00000043867 Rpl22l1-201 protein_coding Mus_musculus 0.000000000000008 84
ENSMUST00000120511 Gm16053-001 processed_pseudogene Mus_musculus 0.00000000000003 82
ENSDART00000101026 mical3a-201 protein_coding Danio_rerio 0.00002 53

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