C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: catenin (cadherin associated protein), alpha-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045142 Ctnnal1-001 ENSMUSG00000038816 10090 - 4:56810935-56865188 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045142
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045142 2.582±0.47 2.571±1.06 20.421±6.88 3.839±2.09 1.335±0.36 1.863±0.43 3.044±0.60 3.785±0.54 2.323±1.78 2.003±0.27 1.504±0.45 4.636±3.47 4.280±1.42 1.379±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000226 CIL_000226_0003 CGP 4:56802345-56865188
CIL_0001GL CIL_0001GL_0002 CGP 4:56810935-56947437

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007266 IEA Rho protein signal transduction
GO:0015629 IEA actin cytoskeleton
GO:0045296 IEA cadherin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325551 CTNNAL1-001 protein_coding Homo_sapiens 0 2254
ENST00000374593 CTNNAL1-005 protein_coding Homo_sapiens 0 472
ENST00000374594 CTNNAL1-003 protein_coding Homo_sapiens 0 684
ENST00000374595 CTNNAL1-002 protein_coding Homo_sapiens 0 2200

Loading