| Transcript ID | Colon | Lung | Placenta |
|---|---|---|---|
| ENST00000374595 | 0.980±0.34 | 8.640±0.00 | 2.023±0.07 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | catenin (cadherin-associated protein), alpha-like 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000374595  |
CTNNAL1-002 |
ENSG00000119326 |
9606 | - |
9:108942569-109013522  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001GI | CIL_0001GI_0001 | CGP | 9:108867517-108950744 |
| CIL_000226 | CIL_000226_0002 | CGP | 9:108934181-109013529 |
| CIL_0001GL | CIL_0001GL_0001 | CGP | 9:108942569-109119945 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005198 | IEA | structural molecule activity |
| GO:0005829 | IDA | cytosol |
| GO:0005886 | IEA | plasma membrane |
| GO:0007155 | IEA | cell adhesion |
| GO:0007266 | IDA | Rho protein signal transduction |
| GO:0015629 | IEA | actin cytoskeleton |
| GO:0045296 | IEA | cadherin binding |
| GO:0051015 | IEA | actin filament binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000045142
|
Ctnnal1-001 | protein_coding | Mus_musculus | 0 | 2200 |
|
ENSMUST00000134754
|
Ctnnal1-002 | processed_transcript | Mus_musculus | 0 | 870 |
|
ENSMUST00000127908
|
Ctnnal1-003 | processed_transcript | Mus_musculus | 0 | 695 |
|
ENSMUST00000107612
|
Ctnnal1-005 | protein_coding | Mus_musculus | 0 | 599 |
|
ENSMUST00000136308
|
Ctnnal1-007 | processed_transcript | Mus_musculus | 0 | 492 |
|
ENSMUST00000134915
|
Ctnnal1-008 | processed_transcript | Mus_musculus | 0 | 244 |
