C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119326-ENSG00000106771 CGP 9606 9:108942569-109119945
GeneTranscriptPositionBiotype
ENSG00000106771 (TMEM245)
transmembrane protein 245 		ENST00000374586 (TMEM245-001) 109015152-109119945 protein_coding
ENST00000413712 (TMEM245-006) 109019904-109087293 protein_coding
ENST00000472207 (TMEM245-003) 109018926-109039327 retained_intron
ENST00000482868 (TMEM245-004) 109036020-109038210 retained_intron
ENST00000491854 (TMEM245-002) 109020088-109108488 nonsense_mediated_decay
ENSG00000119326 (CTNNAL1)
catenin (cadherin-associated protein), alpha-like 1 		ENST00000325551 (CTNNAL1-001) 108942571-109013529 protein_coding
ENST00000374593 (CTNNAL1-005) 108991896-109013512 protein_coding
ENST00000374594 (CTNNAL1-003) 108942579-108963555 protein_coding
ENST00000374595 (CTNNAL1-002) 108942569-109013522 protein_coding
ENST00000488130 (CTNNAL1-004) 108972675-108977420 processed_transcript
ENSG00000119328 (FAM206A)
family with sequence similarity 206, member A 		ENST00000322940 (FAM206A-001) 108934181-108940968 protein_coding
ENST00000374624 (FAM206A-004) 108934487-108950744 protein_coding
ENST00000445175 (FAM206A-002) 108934540-108939634 protein_coding
ENST00000466200 (FAM206A-003) 108934443-108936075 processed_transcript
ENSG00000199331 (Y_RNA)
Y RNA 		ENST00000362461 (Y_RNA.1-218) 109042386-109042487 misc_RNA
ENSG00000201227 (RNA5-8SP3)
RNA, 5.8S ribosomal pseudogene 3 		ENST00000364357 (RNA5-8SP3-201) 108992409-108992569 rRNA
ENSG00000207698 (MIR32)
microRNA 32 		ENST00000384965 (MIR32-201) 109046229-109046298 miRNA
CIL_0001GL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038816-ENSMUSG00000055296 CGP 10090 4:56810935-56947437
GeneTranscriptPositionBiotype
ENSMUSG00000038816 (Ctnnal1)
catenin (cadherin associated protein), alpha-like 1 		ENSMUST00000045142 (Ctnnal1-001) 56810935-56865188 protein_coding
ENSMUST00000107612 (Ctnnal1-005) 56840746-56865154 protein_coding
ENSMUST00000127908 (Ctnnal1-003) 56824058-56839667 processed_transcript
ENSMUST00000131231 (Ctnnal1-009) 56812140-56814319 processed_transcript
ENSMUST00000132764 (Ctnnal1-004) 56844467-56846092 processed_transcript
ENSMUST00000134754 (Ctnnal1-002) 56826003-56865168 processed_transcript
ENSMUST00000134915 (Ctnnal1-008) 56816989-56817656 processed_transcript
ENSMUST00000136308 (Ctnnal1-007) 56826266-56829853 processed_transcript
ENSMUST00000154511 (Ctnnal1-006) 56829525-56838584 processed_transcript
ENSMUSG00000055296 (Tmem245)
transmembrane protein 245 		ENSMUST00000068792 (Tmem245-001) 56866923-56947437 protein_coding
ENSMUST00000107609 (Tmem245-201) 56880247-56947411 protein_coding
ENSMUST00000125082 (Tmem245-004) 56879876-56937897 processed_transcript
ENSMUST00000132816 (Tmem245-003) 56879876-56923458 protein_coding
ENSMUST00000155625 (Tmem245-002) 56885616-56947424 processed_transcript
ENSMUSG00000064595 (Gm22300)
predicted gene, 22300 		ENSMUST00000082661 (Gm22300-201) 56913642-56913767 snoRNA
ENSMUSG00000099002 (Gm25053)
predicted gene, 25053 		ENSMUST00000103982 (Gm25053-201) 56897625-56897757 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GL_0001ENSG00000106771ENST00000374586ENST00000413712ENST00000472207ENST00000482868ENST00000491854ENSG00000119326ENST00000325551ENST00000374593ENST00000374594ENST00000374595ENST00000488130ENSG00000119328ENST00000322940ENST00000374624ENST00000445175ENST00000466200ENSG00000199331ENST00000362461ENSG00000201227ENST00000364357ENSG00000207698ENST00000384965CIL_0001GL_0002ENSMUSG00000038816ENSMUST00000045142ENSMUST00000107612ENSMUST00000127908ENSMUST00000131231ENSMUST00000132764ENSMUST00000134754ENSMUST00000134915ENSMUST00000136308ENSMUST00000154511ENSMUSG00000055296ENSMUST00000068792ENSMUST00000107609ENSMUST00000125082ENSMUST00000132816ENSMUST00000155625ENSMUSG00000064595ENSMUST00000082661ENSMUSG00000099002ENSMUST00000103982
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GL_0001ENSG00000106771ENST00000374586ENST00000413712ENST00000472207ENST00000491854ENSG00000119326ENST00000325551ENST00000374594ENST00000374595ENSG00000119328ENST00000322940ENST00000374624ENST00000445175ENST00000466200ENSG00000199331ENST00000362461ENSG00000201227ENST00000364357ENSG00000207698ENST00000384965CIL_0001GL_0002ENSMUSG00000038816ENSMUST00000045142ENSMUST00000107612ENSMUST00000127908ENSMUST00000134915ENSMUST00000136308ENSMUST00000154511ENSMUSG00000055296ENSMUST00000068792ENSMUST00000107609ENSMUSG00000064595ENSMUST00000082661ENSMUSG00000099002ENSMUST00000103982
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106771 ENST00000374586 N/A N/A 0.878±0.00 8.033±5.58 1.112±0.00 N/A 6.172±2.39 15.459±0.00 N/A N/A 5.384±2.76 N/A N/A 7.934±1.73
ENST00000413712 N/A N/A 7.486±0.00 N/A 9.890±0.00 7.241±0.00 12.951±0.00 11.353±0.00 10.254±0.00 18.560±0.00 12.976±0.00 15.344±0.00 N/A N/A
ENST00000472207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.716±0.00 N/A N/A
ENST00000482868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.206±0.00
ENSG00000119326 ENST00000325551 9.352±0.00 8.169±0.00 4.195±0.00 4.331±0.00 8.261±3.89 6.470±2.95 9.374±5.14 12.988±6.93 4.384±0.21 24.628±11.58 8.279±5.89 25.711±17.36 19.875±12.89 21.020±0.80
ENST00000374593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374594 N/A N/A N/A N/A 6.119±0.00 N/A N/A N/A 2.836±0.00 N/A N/A 26.003±0.00 N/A N/A
ENST00000374595 N/A N/A N/A N/A N/A 0.980±0.34 N/A N/A N/A 8.640±0.00 N/A N/A 2.023±0.07 N/A
ENST00000488130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119328 ENST00000322940 4.121±0.00 4.406±0.00 N/A 2.205±1.66 5.401±0.00 6.024±0.00 4.380±0.00 3.467±2.44 1.859±0.80 3.089±0.00 2.073±1.33 4.901±2.23 3.573±0.61 7.291±1.70
ENST00000374624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.050±0.00
ENST00000445175 N/A N/A N/A N/A N/A 6.107±0.00 N/A 1.430±0.00 N/A N/A N/A 4.849±0.00 N/A N/A
ENST00000466200 N/A N/A N/A N/A N/A N/A N/A N/A 0.875±0.00 N/A 0.975±0.00 N/A N/A N/A
ENSG00000199331 ENST00000362461 N/A N/A N/A 0.787±0.00 0.976±0.00 N/A N/A 0.191±0.00 N/A N/A N/A 0.786±0.00 N/A 0.908±0.15
ENSG00000201227 ENST00000364357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.239±0.00 0.676±0.00
ENSG00000207698 ENST00000384965 N/A N/A N/A N/A 0.374±0.00 N/A 0.696±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038816 ENSMUST00000045142 2.582±0.47 2.571±1.06 20.421±6.88 3.839±2.09 1.335±0.36 1.863±0.43 3.044±0.60 3.785±0.54 2.323±1.78 2.003±0.27 1.504±0.45 4.636±3.47 4.280±1.42 1.379±0.49
ENSMUST00000107612 N/A 9.606±7.29 N/A N/A N/A N/A N/A N/A 0.557±0.06 N/A N/A N/A N/A N/A
ENSMUST00000127908 1.123±0.00 N/A N/A 1.208±0.36 0.363±0.06 N/A N/A 0.953±0.08 0.124±0.00 N/A 0.187±0.00 1.128±0.06 N/A N/A
ENSMUST00000131231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134915 N/A N/A N/A 10.426±0.00 N/A N/A N/A N/A N/A N/A N/A 20.553±0.00 13.687±5.76 N/A
ENSMUST00000136308 7.516±1.57 N/A N/A N/A 3.298±0.60 N/A N/A N/A N/A N/A N/A 9.392±8.99 15.558±0.19 6.830±0.00
ENSMUST00000154511 N/A N/A N/A N/A N/A 2.209±0.00 N/A N/A N/A N/A N/A 3.661±0.00 N/A N/A
ENSMUSG00000055296 ENSMUST00000068792 2.614±0.00 8.307±3.84 2.259±0.43 1.166±0.72 5.494±2.82 3.245±1.25 1.687±0.10 3.077±0.66 1.270±0.54 9.461±3.06 2.908±0.43 6.241±2.42 1.713±0.00 0.512±0.20
ENSMUST00000107609 N/A 8.427±2.13 N/A N/A N/A 2.152±0.05 5.128±0.13 N/A N/A N/A N/A 5.583±0.49 N/A N/A
ENSMUST00000125082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064595 ENSMUST00000082661 N/A 823.836±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.229±0.00 10.733±0.00
ENSMUSG00000099002 ENSMUST00000103982 907.320±0.00 N/A N/A 14.114±0.00 760.636±0.00 N/A 774.291±0.00 N/A 7.675±0.00 N/A N/A N/A N/A N/A

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