C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alkaline ceramidase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045224 Acer2-001 ENSMUSG00000038007 10090 + 4:86874396-86920875 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045224
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045224 9.431±4.56 7.532±0.63 141.880±35.94 0.688±0.13 7.305±1.05 2.630±0.53 7.189±0.33 9.307±0.82 3.551±2.46 91.123±26.24 0.590±0.30 2.149±0.71 12.172±12.71 1.453±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DC CIL_0007DC_0002 CGP 4:86854660-86934822
CIL_0007DB CIL_0007DB_0002 CGP 4:86874396-87230477

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001953 IEA negative regulation of cell-matrix adhesion
GO:0005794 IEA Golgi apparatus
GO:0006672 IEA ceramide metabolic process
GO:0006919 IEA activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0008284 IEA positive regulation of cell proliferation
GO:0010942 IEA positive regulation of cell death
GO:0017040 IEA ceramidase activity
GO:0030173 IEA integral component of Golgi membrane
GO:0032526 IEA response to retinoic acid
GO:0033629 IEA negative regulation of cell adhesion mediated by integrin
GO:0035690 IEA cellular response to drug
GO:0046512 IEA sphingosine biosynthetic process
GO:0071633 IEA dihydroceramidase activity
GO:0090285 IEA negative regulation of protein glycosylation in Golgi

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340967 ACER2-001 protein_coding Homo_sapiens 0 1046
ENST00000420063 AC017081.2-001 processed_pseudogene Homo_sapiens 0 974

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