C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007DC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137154-ENSG00000177076 CGP 9606 9:19375715-19452020
GeneTranscriptPositionBiotype
ENSG00000137154 (RPS6)
ribosomal protein S6 		ENST00000315377 (RPS6-003) 19376285-19380198 protein_coding
ENST00000380381 (RPS6-004) 19378774-19380236 protein_coding
ENST00000380384 (RPS6-002) 19376270-19380206 protein_coding
ENST00000380394 (RPS6-001) 19375715-19380254 protein_coding
ENST00000498815 (RPS6-005) 19376255-19376839 processed_transcript
ENSG00000177076 (ACER2)
alkaline ceramidase 2 		ENST00000340967 (ACER2-001) 19409059-19452020 protein_coding
ENSG00000234853 (NDUFA5P3)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 pseudogene 3 		ENST00000449348 (NDUFA5P3-001) 19383217-19383887 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007DC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028495-ENSMUSG00000038007 CGP 10090 4:86854660-86934822
GeneTranscriptPositionBiotype
ENSMUSG00000028495 (Rps6)
ribosomal protein S6 		ENSMUST00000102814 (Rps6-001) 86854660-86857412 protein_coding
ENSMUST00000123229 (Rps6-004) 86855752-86857354 processed_transcript
ENSMUST00000130001 (Rps6-003) 86855862-86857332 processed_transcript
ENSMUST00000136174 (Rps6-002) 86854804-86857345 processed_transcript
ENSMUSG00000038007 (Acer2)
alkaline ceramidase 2 		ENSMUST00000045224 (Acer2-001) 86874396-86920875 protein_coding
ENSMUST00000084433 (Acer2-002) 86874414-86920875 protein_coding
ENSMUST00000128712 (Acer2-003) 86874414-86932491 processed_transcript
ENSMUST00000135874 (Acer2-004) 86930691-86934822 processed_transcript

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DC_0001ENSG00000137154ENST00000315377ENST00000380381ENST00000380384ENST00000380394ENST00000498815ENSG00000177076ENST00000340967ENSG00000234853ENST00000449348CIL_0007DC_0002ENSMUSG00000028495ENSMUST00000102814ENSMUST00000123229ENSMUST00000130001ENSMUST00000136174ENSMUSG00000038007ENSMUST00000045224ENSMUST00000084433ENSMUST00000128712ENSMUST00000135874
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DC_0001ENSG00000137154ENST00000315377ENST00000380394ENSG00000177076ENST00000340967ENSG00000234853ENST00000449348CIL_0007DC_0002ENSMUSG00000028495ENSMUST00000102814ENSMUST00000123229ENSMUST00000136174ENSMUSG00000038007ENSMUST00000045224ENSMUST00000084433ENSMUST00000128712ENSMUST00000135874
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137154 ENST00000315377 868.903±0.00 1410.870±0.00 113.081±0.00 265.103±154.64 549.248±175.65 1076.847±599.39 204.096±139.27 530.906±327.16 425.641±58.27 887.213±701.28 302.244±180.31 1379.625±775.84 848.281±130.39 663.163±292.85
ENST00000380381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380394 98.090±0.00 161.409±0.00 10.162±0.00 16.792±0.00 52.412±12.77 114.795±0.00 10.490±0.00 20.944±0.00 38.119±0.00 36.756±0.00 31.856±0.00 233.986±178.35 N/A 80.297±0.00
ENST00000498815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177076 ENST00000340967 N/A N/A 0.689±0.00 0.536±0.00 0.925±0.00 0.439±0.00 0.167±0.00 0.683±0.35 3.048±2.79 0.954±0.30 0.125±0.03 0.440±0.00 N/A N/A
ENSG00000234853 ENST00000449348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028495 ENSMUST00000102814 70.169±2.55 10.666±0.76 752.410±186.64 200.060±61.47 83.928±33.12 75.975±19.03 62.140±14.77 64.947±17.01 224.706±210.14 50.626±12.16 131.974±13.09 175.450±183.15 355.963±153.90 73.128±2.68
ENSMUST00000123229 50.248±3.15 111.993±3.92 N/A 105.123±39.53 156.072±11.59 242.583±55.88 50.595±21.38 106.320±4.09 110.505±16.81 161.072±0.00 N/A 166.148±55.06 50.026±0.00 50.934±9.06
ENSMUST00000130001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136174 N/A 4.716±1.12 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038007 ENSMUST00000045224 9.431±4.56 7.532±0.63 141.880±35.94 0.688±0.13 7.305±1.05 2.630±0.53 7.189±0.33 9.307±0.82 3.551±2.46 91.123±26.24 0.590±0.30 2.149±0.71 12.172±12.71 1.453±0.08
ENSMUST00000084433 N/A 1.178±0.00 N/A 0.713±0.00 N/A N/A N/A N/A 0.509±0.00 N/A 0.578±0.32 0.505±0.00 1.684±0.11 0.205±0.00
ENSMUST00000128712 3.461±0.12 6.187±1.90 N/A 2.128±0.97 4.276±1.12 1.790±0.47 4.811±0.00 6.017±0.85 1.501±0.14 82.369±37.97 0.369±0.01 2.013±0.69 17.284±14.19 3.843±0.64
ENSMUST00000135874 N/A N/A N/A 1.745±0.26 N/A 0.734±0.11 N/A N/A 0.485±0.00 N/A N/A 0.114±0.00 1.167±0.22 N/A

Loading