C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007DC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137154-ENSG00000177076 CGP 9606 9:19375715-19452020
GeneTranscriptPositionBiotype
ENSG00000137154 (RPS6)
ribosomal protein S6
ENST00000315377 (RPS6-003) 19376285-19380198 protein_coding
ENST00000380381 (RPS6-004) 19378774-19380236 protein_coding
ENST00000380384 (RPS6-002) 19376270-19380206 protein_coding
ENST00000380394 (RPS6-001) 19375715-19380254 protein_coding
ENST00000498815 (RPS6-005) 19376255-19376839 processed_transcript
ENSG00000177076 (ACER2)
alkaline ceramidase 2
ENST00000340967 (ACER2-001) 19409059-19452020 protein_coding
ENSG00000234853 (NDUFA5P3)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 pseudogene 3
ENST00000449348 (NDUFA5P3-001) 19383217-19383887 processed_pseudogene
CIL_0007DC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028495-ENSMUSG00000038007 CGP 10090 4:86854660-86934822
GeneTranscriptPositionBiotype
ENSMUSG00000028495 (Rps6)
ribosomal protein S6
ENSMUST00000102814 (Rps6-001) 86854660-86857412 protein_coding
ENSMUST00000123229 (Rps6-004) 86855752-86857354 processed_transcript
ENSMUST00000130001 (Rps6-003) 86855862-86857332 processed_transcript
ENSMUST00000136174 (Rps6-002) 86854804-86857345 processed_transcript
ENSMUSG00000038007 (Acer2)
alkaline ceramidase 2
ENSMUST00000045224 (Acer2-001) 86874396-86920875 protein_coding
ENSMUST00000084433 (Acer2-002) 86874414-86920875 protein_coding
ENSMUST00000128712 (Acer2-003) 86874414-86932491 processed_transcript
ENSMUST00000135874 (Acer2-004) 86930691-86934822 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DC_0001ENSG00000137154ENST00000315377ENST00000380381ENST00000380384ENST00000380394ENST00000498815ENSG00000177076ENST00000340967ENSG00000234853ENST00000449348CIL_0007DC_0002ENSMUSG00000028495ENSMUST00000102814ENSMUST00000123229ENSMUST00000130001ENSMUST00000136174ENSMUSG00000038007ENSMUST00000045224ENSMUST00000084433ENSMUST00000128712ENSMUST00000135874
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DC_0001ENSG00000137154ENST00000315377ENST00000380394ENSG00000177076ENST00000340967ENSG00000234853ENST00000449348CIL_0007DC_0002ENSMUSG00000028495ENSMUST00000102814ENSMUST00000123229ENSMUST00000136174ENSMUSG00000038007ENSMUST00000045224ENSMUST00000084433ENSMUST00000128712ENSMUST00000135874
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137154 ENST00000315377 868.903±0.00 1410.870±0.00 113.081±0.00 265.103±154.64 549.248±175.65 1076.847±599.39 204.096±139.27 530.906±327.16 425.641±58.27 887.213±701.28 302.244±180.31 1379.625±775.84 848.281±130.39 663.163±292.85
ENST00000380381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380394 98.090±0.00 161.409±0.00 10.162±0.00 16.792±0.00 52.412±12.77 114.795±0.00 10.490±0.00 20.944±0.00 38.119±0.00 36.756±0.00 31.856±0.00 233.986±178.35 N/A 80.297±0.00
ENST00000498815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177076 ENST00000340967 N/A N/A 0.689±0.00 0.536±0.00 0.925±0.00 0.439±0.00 0.167±0.00 0.683±0.35 3.048±2.79 0.954±0.30 0.125±0.03 0.440±0.00 N/A N/A
ENSG00000234853 ENST00000449348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028495 ENSMUST00000102814 70.169±2.55 10.666±0.76 752.410±186.64 200.060±61.47 83.928±33.12 75.975±19.03 62.140±14.77 64.947±17.01 224.706±210.14 50.626±12.16 131.974±13.09 175.450±183.15 355.963±153.90 73.128±2.68
ENSMUST00000123229 50.248±3.15 111.993±3.92 N/A 105.123±39.53 156.072±11.59 242.583±55.88 50.595±21.38 106.320±4.09 110.505±16.81 161.072±0.00 N/A 166.148±55.06 50.026±0.00 50.934±9.06
ENSMUST00000130001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136174 N/A 4.716±1.12 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038007 ENSMUST00000045224 9.431±4.56 7.532±0.63 141.880±35.94 0.688±0.13 7.305±1.05 2.630±0.53 7.189±0.33 9.307±0.82 3.551±2.46 91.123±26.24 0.590±0.30 2.149±0.71 12.172±12.71 1.453±0.08
ENSMUST00000084433 N/A 1.178±0.00 N/A 0.713±0.00 N/A N/A N/A N/A 0.509±0.00 N/A 0.578±0.32 0.505±0.00 1.684±0.11 0.205±0.00
ENSMUST00000128712 3.461±0.12 6.187±1.90 N/A 2.128±0.97 4.276±1.12 1.790±0.47 4.811±0.00 6.017±0.85 1.501±0.14 82.369±37.97 0.369±0.01 2.013±0.69 17.284±14.19 3.843±0.64
ENSMUST00000135874 N/A N/A N/A 1.745±0.26 N/A 0.734±0.11 N/A N/A 0.485±0.00 N/A N/A 0.114±0.00 1.167±0.22 N/A

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