C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046846 Kdm1a-007 ENSMUSG00000036940 10090 - 4:136550848-136602308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverPlacentaTestisENSMUST00000046846
Transcript ID Brain Heart Liver Placenta Testis
ENSMUST00000046846 23.233±0.00 1.654±0.00 1.626±0.01 8.514±0.55 7.593±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000208 CIL_000208_0002 CGP 4:136469761-136602723

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356634 KDM1A-001 protein_coding Homo_sapiens 0 1657
ENST00000400181 KDM1A-002 protein_coding Homo_sapiens 0 1657
ENST00000465864 KDM1A-005 protein_coding Homo_sapiens 0 701
ENST00000481879 KDM1A-003 retained_intron Homo_sapiens 0 309
ENST00000494920 KDM1A-004 protein_coding Homo_sapiens 0 1090
ENST00000602503 KDM1A-006 retained_intron Homo_sapiens 0 220

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