C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494920 KDM1A-004 ENSG00000004487 9606 + 1:23077234-23083354 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000494920
Transcript ID Adrenal Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000494920 13.046±0.00 9.042±0.00 8.679±0.00 6.769±0.00 10.325±0.00 14.594±0.00 24.727±9.73 17.496±0.00 45.525±8.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046846 Kdm1a-007 protein_coding Mus_musculus 0 1090
ENSMUST00000105847 Kdm1a-002 protein_coding Mus_musculus 0 1090
ENSMUST00000116273 Kdm1a-001 protein_coding Mus_musculus 0 1090
ENSMUST00000125111 Kdm1a-005 retained_intron Mus_musculus 0 501
ENSMUST00000171424 Kdm1a-008 retained_intron Mus_musculus 0 405
ENSMUST00000139690 Kdm1a-006 retained_intron Mus_musculus 0 377
ENSMUST00000147886 Kdm1a-004 retained_intron Mus_musculus 2e-30 137
ENSMUST00000155354 Kdm1a-003 protein_coding Mus_musculus 2e-20 104

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