C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000208_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075556-ENSDARG00000060679 CGP 7955 17:28064873-28161099
GeneTranscriptPositionBiotype
ENSDARG00000060679 (kdm1a)
lysine (K)-specific demethylase 1a 		ENSDART00000085758 (kdm1a-001) 28143502-28161099 protein_coding
ENSDART00000149226 (kdm1a-002) 28156467-28161085 protein_coding
ENSDART00000149458 (kdm1a-007) 28158473-28160990 protein_coding
ENSDART00000149543 (kdm1a-003) 28156816-28159611 protein_coding
ENSDART00000149654 (kdm1a-006) 28158817-28161082 retained_intron
ENSDART00000149767 (kdm1a-005) 28158843-28161085 retained_intron
ENSDART00000149861 (kdm1a-004) 28154436-28156870 protein_coding
CIL_000208_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001089-ENSMUSG00000036940 CGP 10090 4:136469761-136602723
GeneTranscriptPositionBiotype
ENSMUSG00000001089 (Luzp1)
leucine zipper protein 1 		ENSMUST00000001116 (Luzp1-201) 136540354-136549318 protein_coding
ENSMUST00000063021 (Luzp1-004) 136521395-136546394 protein_coding
ENSMUST00000105849 (Luzp1-001) 136469761-136549319 protein_coding
ENSMUST00000129230 (Luzp1-005) 136469850-136540667 protein_coding
ENSMUST00000142248 (Luzp1-003) 136469803-136521710 retained_intron
ENSMUST00000168936 (Luzp1-006) 136545265-136554780 protein_coding
ENSMUST00000170102 (Luzp1-002) 136469761-136549315 protein_coding
ENSMUSG00000036940 (Kdm1a)
lysine (K)-specific demethylase 1A 		ENSMUST00000046846 (Kdm1a-007) 136550848-136602308 protein_coding
ENSMUST00000105847 (Kdm1a-002) 136550544-136602687 protein_coding
ENSMUST00000116273 (Kdm1a-001) 136550540-136602723 protein_coding
ENSMUST00000125111 (Kdm1a-005) 136553121-136555324 retained_intron
ENSMUST00000139690 (Kdm1a-006) 136551873-136553172 retained_intron
ENSMUST00000147886 (Kdm1a-004) 136555207-136561501 retained_intron
ENSMUST00000155354 (Kdm1a-003) 136555235-136568607 protein_coding
ENSMUST00000170979 (Kdm1a-009) 136558532-136577158 protein_coding
ENSMUST00000171424 (Kdm1a-008) 136550877-136552542 retained_intron
ENSMUSG00000082711 (Gm12987)
predicted gene 12987 		ENSMUST00000118562 (Gm12987-001) 136584172-136584660 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000208_0001ENSDARG00000060679ENSDART00000085758ENSDART00000149226ENSDART00000149458ENSDART00000149543ENSDART00000149654ENSDART00000149767ENSDART00000149861CIL_000208_0002ENSMUSG00000001089ENSMUST00000001116ENSMUST00000063021ENSMUST00000105849ENSMUST00000129230ENSMUST00000142248ENSMUST00000168936ENSMUST00000170102ENSMUSG00000036940ENSMUST00000046846ENSMUST00000105847ENSMUST00000116273ENSMUST00000125111ENSMUST00000139690ENSMUST00000147886ENSMUST00000155354ENSMUST00000170979ENSMUST00000171424ENSMUSG00000082711ENSMUST00000118562
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000208_0001ENSDARG00000060679ENSDART00000085758CIL_000208_0002ENSMUSG00000001089ENSMUST00000001116ENSMUST00000063021ENSMUST00000105849ENSMUST00000170102ENSMUSG00000036940ENSMUST00000046846ENSMUST00000105847ENSMUST00000116273ENSMUST00000125111ENSMUST00000170979ENSMUSG00000082711ENSMUST00000118562
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060679 ENSDART00000085758 N/A N/A N/A 11.818±6.18 N/A N/A 4.587±1.76 6.061±1.38 N/A N/A 3.543±0.00 N/A N/A N/A
ENSDART00000149226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001089 ENSMUST00000001116 N/A 1.899±0.76 N/A 6.208±0.00 3.631±2.58 2.547±0.32 N/A 1.347±0.00 0.936±0.55 N/A 0.660±0.41 5.695±1.09 10.346±2.89 N/A
ENSMUST00000063021 N/A N/A N/A 4.522±0.00 N/A N/A N/A N/A N/A N/A N/A 4.217±0.00 N/A 20.338±6.38
ENSMUST00000105849 3.203±0.40 2.724±0.57 4.877±0.20 2.099±0.12 3.268±1.11 6.812±1.11 3.352±0.71 3.057±0.71 0.933±0.27 4.915±0.51 0.896±0.42 3.796±1.84 3.531±0.73 N/A
ENSMUST00000129230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170102 7.255±1.13 1.600±0.43 5.511±1.14 3.305±0.98 4.372±0.87 6.858±1.12 3.053±0.16 4.255±0.84 0.828±0.33 6.630±1.02 0.748±0.30 4.806±2.15 8.063±2.68 21.929±6.85
ENSMUSG00000036940 ENSMUST00000046846 N/A N/A N/A 23.233±0.00 N/A N/A 1.654±0.00 N/A 1.626±0.01 N/A N/A N/A 8.514±0.55 7.593±0.30
ENSMUST00000105847 7.364±2.30 1.624±0.00 9.168±0.04 16.894±7.66 6.841±2.86 2.250±0.00 5.093±1.15 4.534±1.39 4.926±3.15 6.025±1.94 4.973±0.87 11.385±6.90 18.107±4.11 21.034±2.49
ENSMUST00000116273 5.342±1.86 4.235±0.96 6.859±0.90 18.549±12.23 4.845±2.50 7.546±1.64 2.813±0.55 2.534±1.01 4.390±3.03 5.738±2.63 2.269±0.66 9.186±3.57 10.425±4.92 N/A
ENSMUST00000125111 N/A N/A N/A N/A 6.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170979 N/A N/A N/A 10.366±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082711 ENSMUST00000118562 0.298±0.00 0.242±0.08 0.071±0.00 0.443±0.14 0.265±0.09 0.274±0.09 0.282±0.19 0.116±0.03 0.124±0.13 N/A 0.135±0.01 0.986±0.46 0.275±0.05 0.145±0.09

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