C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TruB pseudouridine (psi) synthase homolog 2 (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048044 Trub2-001 ENSMUSG00000039826 10090 - 2:29776110-29788502 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000048044
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000048044 12.099±2.11 8.140±0.94 4.404±0.86 3.927±1.29 13.344±4.44 4.222±0.59 7.645±0.60 8.254±0.91 4.023±1.06 7.465±1.47 5.661±1.78 8.512±2.46 2.903±1.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E8 CIL_0007E8_0002 CGP 2:29761224-29797935

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0005575 ND cellular_component
GO:0008033 IEA tRNA processing
GO:0008150 ND biological_process
GO:0009982 IEA pseudouridine synthase activity
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372890 TRUB2-001 protein_coding Homo_sapiens 0 830
ENST00000460320 TRUB2-003 processed_transcript Homo_sapiens 0 573

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