C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oligonucleotide/oligosaccharide-binding fold containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000049369 Obfc1-001 ENSMUSG00000042694 10090 - 19:47501033-47537119 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049369
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049369 3.489±0.55 0.597±0.00 4.062±0.63 4.912±0.95 2.162±0.96 0.883±0.24 2.380±0.21 1.730±0.54 1.869±1.41 2.335±0.30 1.463±0.30 4.121±1.80 9.986±5.54 4.740±0.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UD CIL_0006UD_0002 CGP 19:47260174-47537507
CIL_000663 CIL_000663_0002 CGP 19:47501033-47645246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000723 IEA telomere maintenance
GO:0000784 ISS nuclear chromosome, telomeric region
GO:0003697 IDA single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IEA nucleolus
GO:0010833 ISS telomere maintenance via telomere lengthening
GO:0043047 ISS single-stranded telomeric DNA binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045111 IEA intermediate filament cytoskeleton
GO:0045740 IDA positive regulation of DNA replication
GO:0070188 IDA Stn1-Ten1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000224950 OBFC1-001 protein_coding Homo_sapiens 0 756
ENST00000369764 OBFC1-002 protein_coding Homo_sapiens 0 756
ENST00000466828 OBFC1-004 processed_transcript Homo_sapiens 0 448

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