C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: smoothelin-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050226 Smtnl2-201 ENSMUSG00000045667 10090 - 11:72390114-72411713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050226
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050226 3.475±0.97 1.872±0.50 2.504±0.09 0.569±0.37 7.624±7.57 1.015±0.42 5.639±0.42 9.318±0.75 0.827±0.46 12.756±2.69 129.560±17.67 6.355±3.66 2.310±1.04 1.135±0.56

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333137 SMTN-002 protein_coding Homo_sapiens 6e-20 104
ENST00000338859 SMTNL2-001 protein_coding Homo_sapiens 0 948
ENST00000347557 SMTN-001 protein_coding Homo_sapiens 0 239
ENST00000358743 SMTN-003 protein_coding Homo_sapiens 6e-20 104
ENST00000389313 SMTNL2-002 protein_coding Homo_sapiens 0 1424
ENST00000404574 SMTN-009 protein_coding Homo_sapiens 3e-20 104
ENST00000472911 SMTN-022 retained_intron Homo_sapiens 0 206
ENST00000489337 SMTN-004 retained_intron Homo_sapiens 6e-20 104
ENST00000493335 SMTN-007 retained_intron Homo_sapiens 5e-20 104
ENST00000504335 SMTN-024 retained_intron Homo_sapiens 5e-20 104
ENST00000612341 SMTN-201 protein_coding Homo_sapiens 6e-20 104
ENST00000619644 SMTN-202 protein_coding Homo_sapiens 0 239
ENST00000624247 SMTN-026 protein_coding Homo_sapiens 2e-20 104

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