C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: smoothelin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404574 SMTN-009 ENSG00000183963 9606 + 22:31093358-31104623 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENST00000404574
Transcript ID Heart Muscle
ENST00000404574 18.169±13.89 11.327±7.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020718 Smtn-002 protein_coding Mus_musculus 0 1729
ENSMUST00000170588 Smtn-201 protein_coding Mus_musculus 0 1116
ENSMUST00000020721 Smtn-001 protein_coding Mus_musculus 0 1116
ENSMUST00000154861 Smtn-004 processed_transcript Mus_musculus 0 1116
ENSMUST00000110011 Smtn-009 protein_coding Mus_musculus 0 675
ENSMUST00000144635 Smtn-005 processed_transcript Mus_musculus 0 632
ENSMUST00000075118 Smtn-003 protein_coding Mus_musculus 0 553
ENSMUST00000050226 Smtnl2-201 protein_coding Mus_musculus 3e-20 104
ENSMUST00000108500 Smtnl2-001 protein_coding Mus_musculus 3e-20 104

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