C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: smoothelin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489337 SMTN-004 ENSG00000183963 9606 + 22:31081320-31104623 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungOvaryTestisENST00000489337
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Ovary Testis
ENST00000489337 3.794±0.00 0.397±0.00 8.010±0.00 7.025±0.00 1.154±0.00 30.895±0.00 11.043±8.82 9.180±3.68 2.973±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170588 Smtn-201 protein_coding Mus_musculus 0 1467
ENSMUST00000020721 Smtn-001 protein_coding Mus_musculus 0 1467
ENSMUST00000075118 Smtn-003 protein_coding Mus_musculus 0 1467
ENSMUST00000110011 Smtn-009 protein_coding Mus_musculus 0 1467
ENSMUST00000154861 Smtn-004 processed_transcript Mus_musculus 0 1251
ENSMUST00000020718 Smtn-002 protein_coding Mus_musculus 0 1116
ENSMUST00000144635 Smtn-005 processed_transcript Mus_musculus 0 632
ENSMUST00000050226 Smtnl2-201 protein_coding Mus_musculus 6e-20 104
ENSMUST00000108500 Smtnl2-001 protein_coding Mus_musculus 6e-20 104

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