C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052290 Pop1-001 ENSMUSG00000022325 10090 + 15:34495304-34530648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverLungMusclePlacentaENSMUST00000052290
Transcript ID Brain Breast Heart Liver Lung Muscle Placenta
ENSMUST00000052290 0.222±0.00 0.418±0.00 0.135±0.07 0.283±0.00 0.160±0.00 0.241±0.09 0.469±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000684 CIL_000684_0002 CGP 15:34484021-34530648
CIL_0003C8 CIL_0003C8_0002 CGP 15:34495304-34678706

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000171 IEA ribonuclease MRP activity
GO:0000172 IEA ribonuclease MRP complex
GO:0001682 IEA tRNA 5'-leader removal
GO:0004526 IEA ribonuclease P activity
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005655 IEA nucleolar ribonuclease P complex
GO:0016078 IEA tRNA catabolic process
GO:0044822 IEA poly(A) RNA binding
GO:0090501 IEA RNA phosphodiester bond hydrolysis
GO:0090502 IEA RNA phosphodiester bond hydrolysis, endonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000349693 POP1-002 protein_coding Homo_sapiens 0 1408
ENST00000401707 POP1-001 protein_coding Homo_sapiens 0 1423
ENST00000522319 POP1-004 protein_coding Homo_sapiens 0 606

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