C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPHK1 interactor, AKAP domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053075 Sphkap-003 ENSMUSG00000026163 10090 - 1:83265127-83408165 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000053075
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053075 0.085±0.00 5.966±0.00 0.014±0.00 0.084±0.04 0.153±0.06 0.002±0.00 0.111±0.00 0.016±0.00 0.010±0.00 0.012±0.00 0.741±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AJ CIL_0004AJ_0003 CGP 1:83159752-83408200
CIL_0004AK CIL_0004AK_0003 CGP 1:83254139-84364180

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344657 SPHKAP-001 protein_coding Homo_sapiens 0 1650
ENST00000392056 SPHKAP-002 protein_coding Homo_sapiens 0 1788

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