C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 171
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053414 Ccdc171-001 ENSMUSG00000052407 10090 + 4:83525545-83864670 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053414
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053414 0.267±0.12 0.691±0.00 0.389±0.12 0.350±0.08 0.166±0.05 0.247±0.14 0.196±0.08 0.508±0.21 0.106±0.01 0.837±0.29 0.384±0.00 6.266±1.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051U CIL_00051U_0003 CGP 4:83455680-83864670
CIL_0007VI CIL_0007VI_0002 VISTA 4:83494853-84095171

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380701 CCDC171-001 protein_coding Homo_sapiens 0 4193
ENST00000432954 CCDC171-008 protein_coding Homo_sapiens 0 953
ENST00000449575 CCDC171-003 protein_coding Homo_sapiens 0 1507
ENST00000470191 CCDC171-005 processed_transcript Homo_sapiens 0 793
ENST00000472806 CCDC171-007 processed_transcript Homo_sapiens 8e-16 88
ENST00000486641 CCDC171-004 processed_transcript Homo_sapiens 0 309
ENST00000498725 CCDC171-006 processed_transcript Homo_sapiens 0 401
ENST00000535968 CCDC171-201 protein_coding Homo_sapiens 0 857

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