C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphorylase kinase beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053771 Phkb-001 ENSMUSG00000036879 10090 + 8:85841002-86061376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053771
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053771 5.170±3.10 5.407±1.80 5.465±4.13 3.738±1.91 6.363±0.59 3.547±0.80 4.796±1.64 2.211±0.48 4.833±1.49 19.177±4.52 4.598±1.72 1.914±1.20 1.360±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VL CIL_0002VL_0002 CGP 8:85717557-86061376
CIL_0002VQ CIL_0002VQ_0002 CGP 8:85840959-86580686

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004689 IEA phosphorylase kinase activity
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005886 IEA plasma membrane
GO:0005964 IEA phosphorylase kinase complex
GO:0005977 IEA glycogen metabolic process
GO:0006468 IEA protein phosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000112543 phkb-201 protein_coding Danio_rerio 0 1271
ENSDART00000148643 phkb-001 protein_coding Danio_rerio 0 1256
ENSDART00000149082 phkb-003 protein_coding Danio_rerio 0 228
ENST00000299167 PHKB-001 protein_coding Homo_sapiens 0 3899
ENST00000323584 PHKB-002 protein_coding Homo_sapiens 0 3699
ENST00000563376 PHKB-014 protein_coding Homo_sapiens 0 595
ENST00000564873 PHKB-017 protein_coding Homo_sapiens 0 350
ENST00000565424 PHKB-013 retained_intron Homo_sapiens 5e-35 152
ENST00000566037 PHKB-003 protein_coding Homo_sapiens 0 880
ENST00000566044 PHKB-004 protein_coding Homo_sapiens 0 4085
ENST00000566275 PHKB-010 protein_coding Homo_sapiens 0 656
ENST00000566319 PHKB-007 retained_intron Homo_sapiens 0 1133
ENST00000566436 PHKB-006 processed_transcript Homo_sapiens 0 272
ENST00000567402 PHKB-005 processed_transcript Homo_sapiens 0 1247
ENST00000568171 PHKB-008 retained_intron Homo_sapiens 0 488
ENST00000570047 PHKB-012 nonsense_mediated_decay Homo_sapiens 0 634

Loading