C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily C, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053785 Trpc1-001 ENSMUSG00000032839 10090 - 9:95706627-95750358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053785
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053785 0.332±0.09 1.050±0.58 0.532±0.00 2.889±2.23 0.586±0.21 0.702±0.24 0.666±0.00 1.799±0.86 0.074±0.02 1.079±0.34 0.061±0.00 0.938±0.39 0.267±0.14 0.794±0.53

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273482 TRPC1-001 protein_coding Homo_sapiens 0 3544
ENST00000460401 TRPC1-004 nonsense_mediated_decay Homo_sapiens 0 313
ENST00000476941 TRPC1-002 protein_coding Homo_sapiens 0 2612
ENST00000480101 TRPC1-005 retained_intron Homo_sapiens 0 580
ENST00000612385 TRPC1-201 protein_coding Homo_sapiens 0 3168

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