C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G2/M-phase specific E3 ubiquitin ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000054308 G2e3-001 ENSMUSG00000035293 10090 + 12:51348061-51376986 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054308
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054308 0.563±0.47 0.673±0.14 1.441±0.13 2.811±2.18 0.439±0.18 0.766±0.20 0.198±0.00 0.377±0.14 3.238±3.06 0.614±0.15 0.234±0.05 0.995±0.45 1.786±1.25 1.263±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EN CIL_0005EN_0002 CGP 12:50341231-51376986
CIL_000893 CIL_000893_0002 VISTA 12:50974162-51576029
CIL_0007KV CIL_0007KV_0003 UCNEbase 12:51002016-51608860
CIL_0003SX CIL_0003SX_0002 CGP 12:51348061-51450096

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0001824 IMP blastocyst development
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:2001243 IMP negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000206595 G2E3-001 protein_coding Homo_sapiens 0 2135
ENST00000438909 G2E3-004 protein_coding Homo_sapiens 0 2104
ENST00000468439 RP11-65E22.2-001 processed_pseudogene Homo_sapiens 0 1720
ENST00000544007 G2E3-003 processed_transcript Homo_sapiens 0 730
ENST00000547638 G2E3-010 processed_transcript Homo_sapiens 0 472
ENST00000549553 G2E3-008 processed_transcript Homo_sapiens 0 492
ENST00000553504 G2E3-015 protein_coding Homo_sapiens 0 2135

Loading