C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G2/M-phase specific E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438909 G2E3-004 ENSG00000092140 9606 + 14:30559158-30616669 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000438909
Transcript ID Adipose Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000438909 0.511±0.00 1.051±0.00 1.306±0.60 1.193±0.00 0.313±0.00 1.531±0.00 0.030±0.00 1.946±1.63 0.582±0.23 7.293±1.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EN CIL_0005EN_0001 CGP 14:29576479-30620063
CIL_000826 CIL_000826_0001 VISTA 14:29972544-30574420
CIL_000893 CIL_000893_0001 VISTA 14:30219860-30821737
CIL_0007KV CIL_0007KV_0001 UCNEbase 14:30273158-30606663
CIL_0003SX CIL_0003SX_0001 CGP 14:30559123-30735812

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054308 G2e3-001 protein_coding Mus_musculus 0 2104
ENSMUST00000119211 G2e3-002 protein_coding Mus_musculus 0 1064
ENSMUST00000121521 G2e3-003 protein_coding Mus_musculus 0 1042
ENSMUST00000144767 G2e3-004 retained_intron Mus_musculus 0 473

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