C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G2/M-phase specific E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000206595 G2E3-001 ENSG00000092140 9606 + 14:30559123-30620063 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000206595
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000206595 0.425±0.00 0.648±0.21 0.583±0.32 0.553±0.22 0.238±0.09 1.167±0.00 0.587±0.00 0.493±0.00 1.463±0.56 0.555±0.40 1.852±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EN CIL_0005EN_0001 CGP 14:29576479-30620063
CIL_000826 CIL_000826_0001 VISTA 14:29972544-30574420
CIL_000893 CIL_000893_0001 VISTA 14:30219860-30821737
CIL_0007KV CIL_0007KV_0001 UCNEbase 14:30273158-30606663
CIL_0003SX CIL_0003SX_0001 CGP 14:30559123-30735812

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IEA protein polyubiquitination
GO:0001824 IEA blastocyst development
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006915 IEA apoptotic process
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:2001243 IEA negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054308 G2e3-001 protein_coding Mus_musculus 0 2135
ENSMUST00000119211 G2e3-002 protein_coding Mus_musculus 0 1075
ENSMUST00000121521 G2e3-003 protein_coding Mus_musculus 0 1074
ENSMUST00000144767 G2e3-004 retained_intron Mus_musculus 0 473

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