C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: diphthamine biosynthesis 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055144 Dph6-003 ENSMUSG00000057147 10090 - 2:114516644-114654887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000055144
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000055144 2.133±0.00 6.769±1.88 0.190±0.00 2.088±0.05 0.646±0.00 0.624±0.00 1.526±0.29 1.999±0.05 0.181±0.00 5.723±2.11 2.588±0.00 0.221±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IU CIL_0008IU_0002 VISTA 2:114111449-114713021
CIL_0006HH CIL_0006HH_0002 CGP 2:114193461-114654964
CIL_0007MM CIL_0007MM_0002 UCNEbase 2:114412124-116821493
CIL_0008V7 CIL_0008V7_0002 VISTA 2:114439395-115040295
CIL_0006HI CIL_0006HI_0002 CGP 2:114516416-115778768

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0017178 IEA diphthine-ammonia ligase activity
GO:0017183 IEA peptidyl-diphthamide biosynthetic process from peptidyl-histidine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256538 DPH6-001 protein_coding Homo_sapiens 0 915
ENST00000558266 DPH6-009 protein_coding Homo_sapiens 0 425
ENST00000559784 DPH6-006 processed_transcript Homo_sapiens 2.8026e-45 185
ENST00000561411 DPH6-004 protein_coding Homo_sapiens 0 658

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