C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055497 Taf9b-001 ENSMUSG00000047242 10090 - X:106206883-106219901 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000055497
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000055497 0.767±0.13 1.422±0.58 1.122±0.27 1.150±0.47 1.044±0.27 0.743±0.29 1.226±0.23 0.372±0.07 0.797±0.04 1.254±0.15 1.575±1.09 4.785±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YZ CIL_0001YZ_0002 CGP X:106187100-106221158

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0006352 IEA DNA-templated transcription, initiation
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217893 AK6-003 protein_coding Homo_sapiens 0 448
ENST00000310611 CYB561D1-003 protein_coding Homo_sapiens 0.00003 57
ENST00000328663 AK6-201 protein_coding Homo_sapiens 0 448
ENST00000341864 TAF9B-001 protein_coding Homo_sapiens 0 1033
ENST00000396646 TAF9BP1-001 processed_pseudogene Homo_sapiens 0 808
ENST00000430195 CYB561D1-002 protein_coding Homo_sapiens 0.00003 57
ENST00000480681 TAF9B-002 retained_intron Homo_sapiens 0 483
ENST00000503245 AK6-005 protein_coding Homo_sapiens 0 429
ENST00000504109 AK6-002 protein_coding Homo_sapiens 0 429
ENST00000506736 AK6-001 protein_coding Homo_sapiens 0 448
ENST00000508954 AK6-007 protein_coding Homo_sapiens 0 316
ENST00000509462 AK6-006 protein_coding Homo_sapiens 0 429
ENST00000512152 AK6-004 protein_coding Homo_sapiens 0 411
ENST00000615404 AK6-202 protein_coding Homo_sapiens 0 448
ENST00000616112 AK6-005 protein_coding Homo_sapiens 0 429
ENST00000616867 AK6-001 protein_coding Homo_sapiens 0 448
ENST00000617775 AK6-004 protein_coding Homo_sapiens 0 429
ENST00000617893 AK6-002 protein_coding Homo_sapiens 0 448
ENST00000620800 AK6-006 protein_coding Homo_sapiens 0 411
ENST00000622236 AK6-003 protein_coding Homo_sapiens 0 429
ENST00000622801 AK6-007 protein_coding Homo_sapiens 0 316

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