C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055776 Arhgap15-001 ENSMUSG00000049744 10090 + 2:43748870-44387623 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055776
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055776 0.442±0.19 0.220±0.13 0.926±0.24 0.230±0.12 1.974±0.88 0.332±0.13 0.344±0.19 0.649±0.25 1.247±1.21 1.395±0.56 0.431±0.12 0.584±0.42 0.138±0.13 0.407±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RY CIL_0008RY_0002 VISTA 2:43481987-44083031
CIL_0006M7 CIL_0006M7_0002 CGP 2:43555329-44395953
CIL_0008IO CIL_0008IO_0002 VISTA 2:43677738-44279507
CIL_0008RZ CIL_0008RZ_0002 VISTA 2:43686279-44287229
CIL_0008RC CIL_0008RC_0002 VISTA 2:43689287-44291110
CIL_0006M8 CIL_0006M8_0002 CGP 2:43748824-44927657

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0007165 IEA signal transduction
GO:0008360 IEA regulation of cell shape
GO:0016020 IEA membrane
GO:0030675 IEA Rac GTPase activator activity
GO:0032855 IEA positive regulation of Rac GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295095 ARHGAP15-001 protein_coding Homo_sapiens 0 1964
ENST00000409869 ARHGAP15-002 protein_coding Homo_sapiens 0 483
ENST00000419455 ARHGAP15-006 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000460776 ARHGAP15-003 processed_transcript Homo_sapiens 0 549
ENST00000469117 ARHGAP15-005 processed_transcript Homo_sapiens 0 322
ENST00000474474 ARHGAP15-004 processed_transcript Homo_sapiens 0 387
ENST00000548242 ARHGAP15-010 processed_transcript Homo_sapiens 0 492
ENST00000548800 ARHGAP15-009 retained_intron Homo_sapiens 0 226
ENST00000548929 ARHGAP15-011 retained_intron Homo_sapiens 0 322
ENST00000549060 ARHGAP15-014 processed_transcript Homo_sapiens 0 481
ENST00000549436 ARHGAP15-013 retained_intron Homo_sapiens 0 542
ENST00000552289 ARHGAP15-012 retained_intron Homo_sapiens 0 278
ENST00000552641 ARHGAP15-008 retained_intron Homo_sapiens 0 800

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