C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rho GTPase activating protein 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549436 ARHGAP15-013 ENSG00000075884 9606 + 2:143519278-143703960 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENST00000549436
Transcript ID Brain Muscle
ENST00000549436 0.169±0.00 0.391±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RY CIL_0008RY_0001 VISTA 2:142856840-143457904
CIL_0006M7 CIL_0006M7_0001 CGP 2:142877498-143768352
CIL_0008IO CIL_0008IO_0001 VISTA 2:143046313-143648075
CIL_0008RZ CIL_0008RZ_0001 VISTA 2:143054292-143655249
CIL_0008RC CIL_0008RC_0001 VISTA 2:143057439-143659166
CIL_0006M8 CIL_0006M8_0001 CGP 2:143091362-144332568

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112822 Arhgap15-003 nonsense_mediated_decay Mus_musculus 0 542
ENSMUST00000055776 Arhgap15-001 protein_coding Mus_musculus 0 542
ENSMUST00000112824 Arhgap15-002 protein_coding Mus_musculus 0 540
ENSMUST00000128630 Arhgap15-005 processed_transcript Mus_musculus 1e-30 137

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