C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008RC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs663 VISTA 9606 2:143057439-143659166
GeneTranscriptPositionBiotype
ENSG00000075884 (ARHGAP15)
Rho GTPase activating protein 15 		ENST00000295095 (ARHGAP15-001) 143129314-143768352 protein_coding
ENST00000409869 (ARHGAP15-002) 143091362-143238352 protein_coding
ENST00000419455 (ARHGAP15-006) 143556408-143624267 nonsense_mediated_decay
ENST00000460776 (ARHGAP15-003) 143193384-143435699 processed_transcript
ENST00000469117 (ARHGAP15-005) 143247290-143437042 processed_transcript
ENST00000473426 (ARHGAP15-007) 143601517-143608759 processed_transcript
ENST00000474474 (ARHGAP15-004) 143228098-143435699 processed_transcript
ENST00000548242 (ARHGAP15-010) 143435266-143533317 processed_transcript
ENST00000548800 (ARHGAP15-009) 143435264-143437103 retained_intron
ENST00000548929 (ARHGAP15-011) 143435314-143487479 retained_intron
ENST00000549060 (ARHGAP15-014) 143706411-143768348 processed_transcript
ENST00000549436 (ARHGAP15-013) 143519278-143703960 retained_intron
ENST00000552289 (ARHGAP15-012) 143487363-143519485 retained_intron
ENST00000552641 (ARHGAP15-008) 143129413-143437357 retained_intron
ENSG00000224288 (AC013437.2)
 ENST00000447254 (AC013437.2-001) 143093056-143094164 processed_pseudogene
ENSG00000224852 (MTND5P24)
MT-ND5 pseudogene 24 		ENST00000438892 (MTND5P24-001) 143094789-143096555 processed_pseudogene
ENSG00000225476 (AC013437.6)
 ENST00000433620 (AC013437.6-001) 143098898-143099933 processed_pseudogene
ENSG00000227557 (MTND3P9)
MT-ND3 pseudogene 9 		ENST00000429526 (MTND3P9-001) 143098484-143098829 processed_pseudogene
ENSG00000228655 (AC096558.1)
 ENST00000442794 (AC096558.1-001) 143314434-143480781 antisense
ENST00000549032 (AC096558.1-003) 143295421-143480789 antisense
ENST00000550516 (AC096558.1-002) 143350931-143480789 antisense
ENSG00000231758 (AC092652.1)
 ENST00000413315 (AC092652.1-001) 143640768-143656179 antisense
ENST00000548051 (AC092652.1-002) 143640756-143648885 antisense
ENSG00000231766 (AC013437.7)
 ENST00000422621 (AC013437.7-001) 143100930-143101355 processed_pseudogene
ENSG00000232772 (MTND4P22)
MT-ND4 pseudogene 22 		ENST00000413116 (MTND4P22-001) 143096839-143098007 processed_pseudogene
ENSG00000236300 (AC013437.4)
 ENST00000448237 (AC013437.4-001) 143098123-143098417 processed_pseudogene
ENSG00000257284 (RP11-190J23.1)
 ENST00000549878 (RP11-190J23.1-001) 143162078-143172172 antisense
ENSG00000257640 (RP11-570L15.2)
 ENST00000546678 (RP11-570L15.2-001) 143295586-143572105 antisense
ENSG00000258268 (RP11-570L15.1)
 ENST00000553076 (RP11-570L15.1-001) 143518867-143598002 antisense
CIL_0008RC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs663 VISTA 10090 2:43689287-44291110
GeneTranscriptPositionBiotype
ENSMUSG00000049744 (Arhgap15)
Rho GTPase activating protein 15 		ENSMUST00000055776 (Arhgap15-001) 43748870-44387623 protein_coding
ENSMUST00000112822 (Arhgap15-003) 43748834-44387619 nonsense_mediated_decay
ENSMUST00000112824 (Arhgap15-002) 43748824-44395953 protein_coding
ENSMUST00000128630 (Arhgap15-005) 44065041-44142456 processed_transcript
ENSMUST00000140528 (Arhgap15-004) 43748869-43894708 processed_transcript
ENSMUSG00000085089 (Arhgap15os)
Rho GTPase activating protein 15, opposite strand 		ENSMUST00000139948 (Arhgap15os-001) 44059238-44065324 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008RC_0001ENSG00000075884ENST00000295095ENST00000409869ENST00000419455ENST00000460776ENST00000469117ENST00000473426ENST00000474474ENST00000548242ENST00000548800ENST00000548929ENST00000549060ENST00000549436ENST00000552289ENST00000552641ENSG00000224288ENST00000447254ENSG00000224852ENST00000438892ENSG00000225476ENST00000433620ENSG00000227557ENST00000429526ENSG00000228655ENST00000442794ENST00000549032ENST00000550516ENSG00000231758ENST00000413315ENST00000548051ENSG00000231766ENST00000422621ENSG00000232772ENST00000413116ENSG00000236300ENST00000448237ENSG00000257284ENST00000549878ENSG00000257640ENST00000546678ENSG00000258268ENST00000553076CIL_0008RC_0002ENSMUSG00000049744ENSMUST00000055776ENSMUST00000112822ENSMUST00000112824ENSMUST00000128630ENSMUST00000140528ENSMUSG00000085089ENSMUST00000139948
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008RC_0001ENSG00000075884ENST00000295095ENST00000409869ENST00000460776ENST00000473426ENST00000548242ENST00000548929ENST00000549060ENST00000549436ENST00000552289ENSG00000224288ENST00000447254ENSG00000224852ENST00000438892ENSG00000225476ENST00000433620ENSG00000227557ENST00000429526ENSG00000228655ENST00000442794ENST00000549032ENST00000550516ENSG00000231758ENST00000413315ENST00000548051ENSG00000231766ENST00000422621ENSG00000232772ENST00000413116ENSG00000236300ENST00000448237ENSG00000257284ENST00000549878ENSG00000257640ENST00000546678ENSG00000258268ENST00000553076CIL_0008RC_0002ENSMUSG00000049744ENSMUST00000055776ENSMUST00000112822ENSMUST00000112824ENSMUST00000128630ENSMUST00000140528ENSMUSG00000085089ENSMUST00000139948
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075884 ENST00000295095 1.317±0.00 4.393±0.00 0.429±0.00 0.366±0.16 3.708±0.00 2.859±0.00 0.862±0.00 0.306±0.00 0.326±0.00 8.266±0.00 N/A 0.939±0.13 0.729±0.32 N/A
ENST00000409869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A 0.403±0.00
ENST00000419455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460776 N/A N/A 0.692±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473426 0.049±0.00 0.965±0.00 N/A 0.021±0.00 0.260±0.24 0.150±0.05 0.086±0.04 0.032±0.00 0.046±0.00 0.656±0.57 N/A 0.190±0.19 0.021±0.00 0.015±0.00
ENST00000474474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548242 N/A N/A N/A N/A N/A N/A N/A N/A 2.756±0.00 N/A 1.595±0.00 1.027±0.00 N/A N/A
ENST00000548800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548929 N/A N/A 1.079±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549060 N/A N/A N/A 0.310±0.00 N/A N/A N/A N/A N/A N/A N/A 0.723±0.00 N/A 4.649±0.00
ENST00000549436 N/A N/A N/A 0.169±0.00 N/A N/A N/A N/A N/A N/A 0.391±0.00 N/A N/A N/A
ENST00000552289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.663±0.00 N/A N/A
ENST00000552641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224288 ENST00000447254 N/A 0.031±0.00 N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A 0.059±0.00 0.231±0.00 N/A
ENSG00000224852 ENST00000438892 N/A 0.006±0.00 N/A N/A 0.031±0.00 N/A 0.021±0.00 N/A N/A 0.049±0.00 N/A N/A 0.093±0.07 0.034±0.00
ENSG00000225476 ENST00000433620 0.033±0.00 N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A 0.050±0.00 N/A 0.225±0.00 0.232±0.00 0.060±0.00
ENSG00000227557 ENST00000429526 N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A N/A 0.217±0.00 N/A
ENSG00000228655 ENST00000442794 N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A
ENST00000549032 N/A N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A 0.701±0.00 N/A N/A
ENST00000550516 0.054±0.00 N/A N/A 0.069±0.00 N/A 0.016±0.00 N/A N/A 0.088±0.00 0.070±0.00 N/A 0.107±0.04 N/A 0.055±0.00
ENSG00000231758 ENST00000413315 N/A 0.071±0.00 N/A 0.183±0.00 N/A 0.066±0.00 N/A 0.047±0.00 N/A 0.411±0.00 N/A 0.420±0.00 N/A 0.172±0.00
ENST00000548051 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A
ENSG00000231766 ENST00000422621 N/A N/A N/A N/A N/A N/A 0.469±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000232772 ENST00000413116 0.049±0.00 0.018±0.00 N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A 0.257±0.00 N/A
ENSG00000236300 ENST00000448237 N/A 0.114±0.00 N/A N/A 0.350±0.00 4.749±0.00 N/A N/A N/A N/A N/A 0.283±0.00 0.291±0.00 N/A
ENSG00000257284 ENST00000549878 N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257640 ENST00000546678 0.182±0.00 0.624±0.00 N/A N/A 0.108±0.00 0.099±0.00 N/A N/A 0.047±0.00 N/A N/A 0.924±0.00 N/A 0.073±0.00
ENSG00000258268 ENST00000553076 N/A 0.109±0.00 N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A 0.082±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000049744 ENSMUST00000055776 0.442±0.19 0.220±0.13 0.926±0.24 0.230±0.12 1.974±0.88 0.332±0.13 0.344±0.19 0.649±0.25 1.247±1.21 1.395±0.56 0.431±0.12 0.584±0.42 0.138±0.13 0.407±0.16
ENSMUST00000112822 1.141±0.00 N/A 0.380±0.00 N/A 1.079±0.97 N/A N/A 0.459±0.18 0.880±0.33 0.343±0.00 N/A 0.328±0.00 0.088±0.00 N/A
ENSMUST00000112824 N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.059±0.65 0.070±0.00 0.995±0.00
ENSMUST00000140528 N/A 0.070±0.00 N/A N/A 0.374±0.10 N/A 0.009±0.00 N/A 0.028±0.00 N/A N/A N/A N/A 0.053±0.01
ENSMUSG00000085089 ENSMUST00000139948 N/A 0.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.290±0.11 N/A N/A

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