C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056053 Setd1b-201 ENSMUSG00000038384 10090 + 5:123142957-123167410 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000056053
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000056053 1.516±0.14 2.404±0.60 1.458±0.00 1.167±0.57 1.373±0.68 0.439±0.05 1.147±0.39 0.885±0.45 3.144±0.04 0.398±0.06 1.413±0.84 5.907±4.86 2.880±1.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006S CIL_00006S_0003 CGP 5:123103044-123167435
CIL_0002ZI CIL_0002ZI_0002 CGP 5:123142193-123182725

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0048188 ISS Set1C/COMPASS complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267197 SETD1B-201 protein_coding Homo_sapiens 0 3598
ENST00000542440 SETD1B-001 protein_coding Homo_sapiens 0 3602
ENST00000604567 SETD1B-002 protein_coding Homo_sapiens 0 3760
ENST00000619791 SETD1B-202 protein_coding Homo_sapiens 0 3760

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