C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 34
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056362 Krt34-001 ENSMUSG00000043485 10090 - 11:100037347-100041554 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungMuscleOvaryTestisENSMUST00000056362
Transcript ID Bladder Lung Muscle Ovary Testis
ENSMUST00000056362 0.005±0.00 0.034±0.01 0.199±0.00 0.037±0.00 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0019 CGP 11:100023634-100041554
CIL_00056U CIL_00056U_0010 CGP 11:100037347-100050551

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000007735 KRT33A-001 protein_coding Homo_sapiens 0 1393
ENST00000225550 KRT37-001 protein_coding Homo_sapiens 0 464
ENST00000225899 KRT32-001 protein_coding Homo_sapiens 0 889
ENST00000246639 KRT35-001 protein_coding Homo_sapiens 0 968
ENST00000246646 KRT38-001 protein_coding Homo_sapiens 0 475
ENST00000251645 KRT31-001 protein_coding Homo_sapiens 0 1339
ENST00000251646 KRT33B-001 protein_coding Homo_sapiens 0 1356
ENST00000393988 KRT41P-001 unprocessed_pseudogene Homo_sapiens 0 532
ENST00000393989 KRT35-201 protein_coding Homo_sapiens 0 968
ENST00000394001 KRT34-001 protein_coding Homo_sapiens 0 1411
ENST00000570596 KRT33B-001 protein_coding Homo_sapiens 0 1356
ENST00000571312 RP1-18F17.1-001 protein_coding Homo_sapiens 0 1417
ENST00000572799 AC003958.1-001 unprocessed_pseudogene Homo_sapiens 0 532
ENST00000573281 KRT31-001 protein_coding Homo_sapiens 0 1339
ENST00000574588 KRT37-001 protein_coding Homo_sapiens 0 464
ENST00000576236 KRT33A-001 protein_coding Homo_sapiens 0 1393
ENST00000576522 AC004231.7-001 protein_coding Homo_sapiens 0 1411
ENST00000620421 KRT33B-201 protein_coding Homo_sapiens 0 1358

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