C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LSM14 homolog B (SCD6, S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058764 Lsm14b-002 ENSMUSG00000039108 10090 + 2:180026398-180035465 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058764
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058764 6.354±0.00 6.457±0.58 4.900±0.24 24.577±18.18 3.574±0.87 2.011±0.27 1.821±0.35 3.494±0.71 6.014±0.00 7.724±2.31 2.429±1.14 3.786±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DN CIL_0001DN_0002 CGP 2:179912146-180035465
CIL_0001DO CIL_0001DO_0002 CGP 2:180024987-180042433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000279068 LSM14B-001 protein_coding Homo_sapiens 0 1118
ENST00000279069 LSM14B-002 protein_coding Homo_sapiens 0 394
ENST00000361670 LSM14B-006 protein_coding Homo_sapiens 0 1223
ENST00000370915 LSM14B-005 protein_coding Homo_sapiens 0 573
ENST00000400318 LSM14B-003 protein_coding Homo_sapiens 0 464

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