C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crumbs family member 1, photoreceptor morphogenesis associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367399 CRB1-005 ENSG00000134376 9606 + 1:197268413-197477879 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleOvaryPlacentaENST00000367399
Transcript ID Brain Heart Muscle Ovary Placenta
ENST00000367399 1.002±0.06 0.010±0.00 0.242±0.00 0.078±0.05 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LY CIL_0001LY_0002 CGP 1:197268204-197775696

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005576 IEA extracellular region
GO:0007163 TAS establishment or maintenance of cell polarity
GO:0007267 TAS cell-cell signaling
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059825 Crb1-001 protein_coding Mus_musculus 0 2819
ENSMUST00000159409 Gm16273-001 unprocessed_pseudogene Mus_musculus 1e-26 126

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