C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crumbs family member 1, photoreceptor morphogenesis associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475659 CRB1-006 ENSG00000134376 9606 + 1:197268276-197358128 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverENST00000475659
Transcript ID Bladder Brain Breast Colon Heart Liver
ENST00000475659 0.179±0.00 1.051±0.26 0.015±0.00 0.125±0.07 0.074±0.00 0.020±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LY CIL_0001LY_0002 CGP 1:197268204-197775696

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059825 Crb1-001 protein_coding Mus_musculus 0 1103
ENSMUST00000173947 Gm18522-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000174783 Gm18520-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000177313 Gm18513-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000159409 Gm16273-001 unprocessed_pseudogene Mus_musculus 9e-27 126

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