C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: teashirt zinc finger homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580243 TSHZ1-005 ENSG00000179981 9606 + 18:75211529-75288641 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLungMuscleOvaryPlacentaENST00000580243
Transcript ID Adipose Breast Heart Lung Muscle Ovary Placenta
ENST00000580243 7.853±0.00 1.606±0.00 1.057±0.00 3.002±0.00 0.792±0.00 21.499±0.00 2.299±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000995 CIL_000995_0001 VISTA 18:74724456-75325643
CIL_0007J6 CIL_0007J6_0002 UCNEbase 18:75128581-76219630

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0010468 IEA regulation of gene expression
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060303 Tshz1-001 protein_coding Mus_musculus 0 3919
ENSMUST00000175783 Tshz1-002 processed_transcript Mus_musculus 0 3326
ENSMUST00000021641 Tshz3-001 protein_coding Mus_musculus 0 462
ENSDART00000109493 TSHZ2-201 protein_coding Danio_rerio 0 222

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