C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: teashirt zinc finger homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322038 TSHZ1-001 ENSG00000179981 9606 + 18:75210755-75289950 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322038
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322038 14.127±0.00 2.066±0.00 1.202±0.00 2.675±1.03 0.941±0.02 3.195±0.00 1.210±0.39 1.369±0.70 2.153±0.00 2.831±0.68 1.155±0.32 3.672±2.56 3.787±0.92 2.096±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000995 CIL_000995_0001 VISTA 18:74724456-75325643
CIL_0007J6 CIL_0007J6_0002 UCNEbase 18:75128581-76219630

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0009952 IEA anterior/posterior pattern specification
GO:0010468 IEA regulation of gene expression
GO:0042474 IEA middle ear morphogenesis
GO:0046872 IEA metal ion binding
GO:0060023 IEA soft palate development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175783 Tshz1-002 processed_transcript Mus_musculus 0 4087
ENSMUST00000060303 Tshz1-001 protein_coding Mus_musculus 0 3664
ENSMUST00000021641 Tshz3-001 protein_coding Mus_musculus 0 462
ENSDART00000109493 TSHZ2-201 protein_coding Danio_rerio 0 222

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