C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytokine receptor-like factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061283 Crlf3-001 ENSMUSG00000017561 10090 - 11:80046493-80080991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061283
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061283 5.328±0.14 2.085±0.27 5.693±0.65 3.356±0.91 12.495±3.34 3.585±0.86 3.239±0.63 3.817±1.16 17.921±16.68 14.740±0.76 0.606±0.63 5.841±1.63 10.139±3.00 2.438±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000141 CIL_000141_0002 CGP 11:80046493-80135794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 ISS G1/S transition of mitotic cell cycle
GO:0003674 ND molecular_function
GO:0005737 ISS cytoplasm
GO:0030308 ISS negative regulation of cell growth
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046427 ISS positive regulation of JAK-STAT cascade
GO:0071158 ISS positive regulation of cell cycle arrest

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324238 CRLF3-001 protein_coding Homo_sapiens 0 1568
ENST00000440950 AC092568.1-001 processed_pseudogene Homo_sapiens 0 870
ENST00000578692 CRLF3-002 nonsense_mediated_decay Homo_sapiens 0 1116
ENST00000583805 CRLF3-004 processed_transcript Homo_sapiens 0 250

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